Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g1084 ATGGTTTGGTTTCAATGCGAGGATTGTGGTGACAATCTGAAGAAACCCAAGTTACCGAATCATTTCAGAACCTGTTCTGCTTCTAAGTTGTCTTGCATTGACTGTGGACAAATATTTGGACAAGACACCGTTCAGCAGCACACACAATGTATGACAGAAATGGAAAAGTATGGTCCAAAAGGCCAAGGAAAAACTTTGAATGTTGCAACTGCCAAACCTAACAGTAATAACAAGCAAAAGCCTGAAGTTGATATTCATGTTGGGTTATCAGAAAGGCCTCCGTGGTTTTGTGGCCTCTGCAACACAAAAGCTACGAGTAAGCAAGCACTTCTTCTCCATGCCGATGGAAAGAAACACAGGGCAAAAGCTCGGGCATTCCATGCTGCAAATCAACAACCAGTTGAGACGGACACATCTGCTCCAGACGCAAAGCTTCCAGTGGAGCATGCTTCTAATGATAAGGTCCAAGTGAACAATAGCGTAGATCAGACAAAATTGCAAGATCCATCTGAACACAATAACTTGAAATCAGGGAATGAAATCTCTCCATCAAATAAAAAGAGGAAATCTGATGTGGTGGAGGATAAACCTAGTAGGAAAAAGGGCAGGGATGACAGTCCAGGTGATTTGGGAAATGGGGAAGTAGTTCAGGCTGAAGGAGAAGAAGCTGGGAAGAAAGAAAGAATAGTTAACGACAAGAATATAAAGTGGAAGAAGTTTATCAAATCAGCATTGAAATCTCAGCCTAATGGAAAATTGAAGATGAAGAAGTTGAGAAAACATGTTTTGGAAGCCTTGCAAGAATCTGGCGTTGAAGTGGATGAAACTGAACTTAGTGAGGCACTTGAGCATAAGATCAATTCAAGTTCCAAATTTGCAGTTGAGAAGAAGTATGTGCGTTTGGTGGCTAAGGATGGTAAAGAGTAG 927 0.4142 MVWFQCEDCGDNLKKPKLPNHFRTCSASKLSCIDCGQIFGQDTVQQHTQCMTEMEKYGPKGQGKTLNVATAKPNSNNKQKPEVDIHVGLSERPPWFCGLCNTKATSKQALLLHADGKKHRAKARAFHAANQQPVETDTSAPDAKLPVEHASNDKVQVNNSVDQTKLQDPSEHNNLKSGNEISPSNKKRKSDVVEDKPSRKKGRDDSPGDLGNGEVVQAEGEEAGKKERIVNDKNIKWKKFIKSALKSQPNGKLKMKKLRKHVLEALQESGVEVDETELSEALEHKINSSSKFAVEKKYVRLVAKDGKE 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g1084 308 FunFam cell growth-regulating nucleolar protein-like 1 50 - -
Lele19g1084 308 FunFam UBP1-associated proteins 1C 89 132 - -
Lele19g1084 308 Gene3D Classic Zinc Finger 89 131 - -
Lele19g1084 308 ProSiteProfiles Zinc finger C2HC LYAR-type profile. 27 51 - -
Lele19g1084 308 ProSiteProfiles Zinc finger C2HC LYAR-type profile. 1 26 - -
Lele19g1084 308 PANTHER CELL GROWTH-REGULATING NUCLEOLAR PROTEIN LYAR 1 302 IPR039999 GO:0003677
Lele19g1084 308 SUPERFAMILY beta-beta-alpha zinc fingers 30 58 IPR036236 -
Lele19g1084 308 SUPERFAMILY beta-beta-alpha zinc fingers 1 26 IPR036236 -
Lele19g1084 308 SUPERFAMILY beta-beta-alpha zinc fingers 84 130 IPR036236 -
Lele19g1084 308 Pfam Zinc-finger of C2H2 type 95 119 - -
Lele19g1084 308 MobiDBLite consensus disorder prediction 152 181 - -
Lele19g1084 308 MobiDBLite consensus disorder prediction 182 208 - -
Lele19g1084 308 MobiDBLite consensus disorder prediction 122 227 - -
Lele19g1084 308 Pfam LYAR-type C2HC zinc finger 30 57 IPR014898 -
Lele19g1084 308 Gene3D - 1 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g1084 Lele-ChrLele19 7022627 7025081 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g1084 1 144 C2H2 Transcription Factor Family AT2G19380 39.901 8.17e-40 145