Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g1082 ATGGGGGAAGAAGCCGTCTTGGATGCTACTGAAGTGATCAGGCACCATCAAAGTCTTGAATTTGACATATACCCTTTGAATGGCTACTACTTTGGCTCCAAAAATCCCATTCCCTTCAAGGACGAGACCTTGGTTGATCGTCTTCAGAGAATGAAATCGAACTATGCTGCTCATGGGATACGAAATTGTGTGGAAGCTGTCATGCTGGTTGAGTTGTTCAAACATCCACATTTGTTGATGCTGCAAGTAAGGAATTCCATCTTTAAACTCCCCGGTGGTCGCCTAAGACCTGGCGAATCAGGGGCTTCTGAATTTCCAGATATTGATGGATTAAAGCGTAAGCTGGCGAGGAAGCTAAATGTTGGTGAACGTGGGGATGGGACTGAATGGGAGGTGGGCGAATGCCTTGGAATGTGGTGGAGACCTGATTTTGAAACTTTACTGTATCCATACTTGCCACCTAATGTGAAGAGTCCAAAGGAGTGCACGAAACTCTACCTTGTGAAGCTACCAGAGTCACGAAAGTTCATCGTGCCCAAGAATCACAAGCTGCTTGCAGTCCCATTGTGCCAAATTCATGAAAATCACAAGACATATGGGACAATCATATCAGGGGTCCCCCAGCTGCTTTCAAAATTCTCATTCAACATGATCGAGACTTGA 663 0.454 MGEEAVLDATEVIRHHQSLEFDIYPLNGYYFGSKNPIPFKDETLVDRLQRMKSNYAAHGIRNCVEAVMLVELFKHPHLLMLQVRNSIFKLPGGRLRPGESGASEFPDIDGLKRKLARKLNVGERGDGTEWEVGECLGMWWRPDFETLLYPYLPPNVKSPKECTKLYLVKLPESRKFIVPKNHKLLAVPLCQIHENHKTYGTIISGVPQLLSKFSFNMIET 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g1082 220 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 20 217 - -
Lele19g1082 220 PANTHER PRE-MRNA CLEAVAGE FACTOR IM, 25KD SUBUNIT 16 219 IPR016706 GO:0003729|GO:0005849|GO:0006378
Lele19g1082 220 FunFam Pre-mRNA cleavage factor Im subunit 2 19 217 - -
Lele19g1082 220 PIRSF CPSF-25 2 220 IPR016706 GO:0003729|GO:0005849|GO:0006378
Lele19g1082 220 Pfam Nucleotide hydrolase 21 213 IPR016706 GO:0003729|GO:0005849|GO:0006378
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g1082 Lele-ChrLele19 7011820 7014603 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g0460 17 16901988 16904838 Lele19g1082 19 7011820 7014603 hybridization
Lele18g1049 18 7077590 7087908 Lele19g1082 19 7011820 7014603 hybridization