Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g1080 ATGGAGAAACCTCGTAGAAGTTTTCAATGGTTGATGGAGGTTGCCTCACATTTCGAGTCATCTTTTGCCTTTGCCATTTCAGAAATCAAAGGCATATTATATAGAATCCTCGAAGGATTTGAAAGGATAAAAGTTATTGCTACAAGGCAAAGCAAGGAAGGCTATGGAGGAAATATCTTCTACTGTGGCCGTACCATTTACACTTGGCAAGTTGACTCAGGAGCATCAGTAACAACAACCCACATGGAGATATCTGGGTTGAAGCTTATGGCTGCTAATACAGCAGCAGCTTTGATTTTGAATCCTGCAATGAAGGATTGTGAAAATCAAAGGGTTTGTTTAAGTTCACAGCATCAGATTACTGTATCTGCAGAAAAAAAGGAGAATCATGTTGCTGATGGTGCCCTTGTTTCAGATTTGACTGACAGAAATTGGGTAGGGAATGAAACAACCAATCAGAAAAGCAAAAATGCTGATTTTCAATGTCCAAATGATTCAAGCTCGCAATCTGTTGTTGCTGGGGACCAATCTTCAACTTTGAGGACTAATTGTTCAGAGATTGATCCACCAATTAGTATTAGCAAGATTGAAGATGATATGCAGAAAATGGTCTCTGTTGAAATGAATATTGAAATTTATGATGGAAGTGGATCAGATGGATGTGATTCTAAACCATCAGATTCGCTTCTTGCAATATCAGAGGAGAAAGTATGCAGAAGAAGCTACCAGAATGGTTTAGAAATGAATAGTGGGGCCCTTTGGGGATTTTCATCAATCTGTGGAAGGAGAGAAGAAATGGAAGATGCTATTGCAGTTGAGCCTCAACTCTTGCAAGTAACTTCACAGATGCTAATGGAAAACCATGAGACTGAAAACCCAAAATACTCAGAAGCCCACTTTTTTGGTGTCTATGATGGACATGGGGGTTGCCAGGTTGCTAATTACTGCCGGGAACGTCTGCATTCAGTGTTGATTGAGGAGATAGAGGCTGCAGGAACGGGCTTGGGAGAAAACAATGAAGGAGACAACTGGCAGGACCAATGGAAGAAAGCATTCTGCAAGTGTTTTCAGAAAGTTGATGATGAGGTTGACGGAAAAAGTGAAGACAACAGTGATGGATCAGAGTCTAGTTCAGAACCTCTTGCTCCTGAAACTGTTGGTTCTACTGCCGTGGTGGCCATTTTAAGTCAAACTCACATAATAGTAGCAAATTGTGGGGATTCAAGAGCAGTCTTGTGCCGTGGAAAAGAAGCCATTCCGTTGTCTGCTGACCACAAACCAAATAGGGAGGATGAGTGGGAAAGAATAGAAGCTGCAGGAGGAAGGGTCATACAGTGGAATGGGTACAGAGTTCTTGGGGTTTTGGCAGTGTCAAGGTCCATAGGTGACAGATACCTGAAACCATGGATAATTCCTCAACCAGAACTACAGTTTATCCTGAGAGAGAAGAATGATGAGTGCCTTATTCTAGCCAGTGATGGTCTATGGGATGTGATGACAAATGAAGAAGCCTGCCAAGCTGCAAGAAACAGAATCCTTCTTTGGCACAAAAAGTATGGCAATGGCAATGGAAACAACAATGTATCTGCTAAAGAAGAAGGAGGAGGAGGAGTTGATCCTGCAGCTCAGTTTGCTGCAGAGTATCTTTCTAGACTTGCCCTTCAAAGGGGAAGTAAAGATAACATATCTGTTATTGTGGTTGACTTGAAGGTTCAAAGAAAAGTTAAGACAAGGGCATAA 1740 0.4172 MEKPRRSFQWLMEVASHFESSFAFAISEIKGILYRILEGFERIKVIATRQSKEGYGGNIFYCGRTIYTWQVDSGASVTTTHMEISGLKLMAANTAAALILNPAMKDCENQRVCLSSQHQITVSAEKKENHVADGALVSDLTDRNWVGNETTNQKSKNADFQCPNDSSSQSVVAGDQSSTLRTNCSEIDPPISISKIEDDMQKMVSVEMNIEIYDGSGSDGCDSKPSDSLLAISEEKVCRRSYQNGLEMNSGALWGFSSICGRREEMEDAIAVEPQLLQVTSQMLMENHETENPKYSEAHFFGVYDGHGGCQVANYCRERLHSVLIEEIEAAGTGLGENNEGDNWQDQWKKAFCKCFQKVDDEVDGKSEDNSDGSESSSEPLAPETVGSTAVVAILSQTHIIVANCGDSRAVLCRGKEAIPLSADHKPNREDEWERIEAAGGRVIQWNGYRVLGVLAVSRSIGDRYLKPWIIPQPELQFILREKNDECLILASDGLWDVMTNEEACQAARNRILLWHKKYGNGNGNNNVSAKEEGGGGVDPAAQFAAEYLSRLALQRGSKDNISVIVVDLKVQRKVKTRA 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g1080 579 MobiDBLite consensus disorder prediction 364 384 - -
Lele19g1080 579 SMART PP2C_4 243 567 IPR001932 -
Lele19g1080 579 MobiDBLite consensus disorder prediction 151 175 - -
Lele19g1080 579 ProSitePatterns PPM-type phosphatase domain signature. 300 308 IPR000222 GO:0043169
Lele19g1080 579 Pfam Protein phosphatase 2C 255 562 IPR001932 -
Lele19g1080 579 Gene3D - 241 579 IPR036457 -
Lele19g1080 579 ProSiteProfiles PPM-type phosphatase domain profile. 253 569 IPR001932 -
Lele19g1080 579 PANTHER PROTEIN PHOSPHATASE 218 569 - -
Lele19g1080 579 SUPERFAMILY PP2C-like 247 570 IPR036457 -
Lele19g1080 579 CDD PP2Cc 255 569 IPR001932 -
Lele19g1080 579 FunFam Protein phosphatase 2C 16 241 579 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g1080 Lele-ChrLele19 7000039 7003913 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g1080 143 578 PP2C-type Phosphatase Gene Family AT4G26080 51.826 6.49e-139 408