Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g1077 ATGAACGTGACAATACTTCCTTTATCCTCCGTATGCATGCGTTCAGTGCTAGAAAAGAAGTTAGCATCTTCTCATGTACCAGAAGAAGAACAGATACATCAACTGAAGGATTTAGAGCGCAAGGAGACTGAGTTTATACGGTTAAAACGACACAAAATATGTGTCAGTGATTTTGACCGTCTAGATATTCTTGGGAGGGGAGCTTTGGAGAGGTACAAATGTGTGAGAATTTGTCGTGAGAACAAATCAGGCAATATTTATGCCATGAAAAAATTGAAAAAGTCTGAAATGCTCAGCAGGGGGCAGGTTGAACATGTTAGAGCTGAGCGGAACTTATTGGCAGAAGTTGCGAGTCATTGCATTGTGAAACTCTATTACTCCTTTCTGGATGCTGACTACTTATATCTGATAATGGAATATTTACCGGGTGGCGATTTAATGACTTTGCTGATTAGAGAAGAAACTTTGACCGAAAGTGTGGCTAGATTTTACATCACTCAAAGCGTTTTGGCCATAGAATCTATTCATAAACACAATTACATTCACCGTGATATAAAACCTGACAACCTTCTGTTGGACAGAAATGATCATATGAAACTCTCTGATTTTGGTCGTTGCAAGCAACTTGGTTGCACAAATTTATCATCAATAAATGAAGGTGAAGTCTTAGATGATGAGAACTTGAGTGATACTATGGATATTGATGGATCTTTCCCAAATTCTAAAAAATGTGGAAGGCGCTGGAAAAGTCCCCTTGAACAACTTCAGCATTGGCAAATAAACAGGAGGAAATTGGCGTTTTCCACAGTTGTAACTCCAGACTATATTGCTCCTGAAGTGTTGCTTAAAAAGGGATATGGTGTGGAGTGTGACTGGTAGTGGTCTCTTGCTGCTATCATGCACGTCCTTGGTTCGGAGATGTTGTATGGGATAAGCTTCTATGAAATGAACGCAGCATTCAAACCACAAGTCTTTGGAGAGCTTGGCACACAGAATTTTATGAAATTTGATGAGGTTAGATATGATGAATTCTTTCTGGCTGCTAATTATATCCATGATCTCTTGAACTCTGTTTCTTGGTCCCTCAAGCTAGTCCATCCCTTGGCCATCATGAAAAATCACTGCTTTGTATTTACTCTATTTATTCAGAAGCAATATGTCACAACTTCTTTAACTTATAGAACAATGTCCGAGCTCTTTCAAATTGCATGCATATATGTTGAACAACCAAAACCAACTAGAATTGGATCCGGTCCCATCAGAAAGTTGCTATTGACTCCTCAAGATCTTAGCTTTGTTGGTTATACATATAAGCATTTTGATGCTGTCAAGGGTATGCATCATATGGGCCTGCTTAGCTTCCCGCCAGCTTTGCCTGCATTTGCTATCAACTTTAGTTTTGAGAAGAATGACACGGGTATCATATCATTTGGTATGCTTATCAGTTGTAACCCTGATTTGGTTCAGAATTTTCTGTCTAGAAATTGCAACATTTGTCTGTCAAAAAGTGAAAGTTTTGAAGACGTGAAGAAACTTGTAGTATGA 1545 0.3877 MNVTILPLSSVCMRSVLEKKLASSHVPEEEQIHQLKDLERKETEFIRLKRHKICVSDFDRLDILGRGALERYKCVRICRENKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYYSFLDADYLYLIMEYLPGGDLMTLLIREETLTESVARFYITQSVLAIESIHKHNYIHRDIKPDNLLLDRNDHMKLSDFGRCKQLGCTNLSSINEGEVLDDENLSDTMDIDGSFPNSKKCGRRWKSPLEQLQHWQINRRKLAFSTVVTPDYIAPEVLLKKGYGVECDWXWSLAAIMHVLGSEMLYGISFYEMNAAFKPQVFGELGTQNFMKFDEVRYDEFFLAANYIHDLLNSVSWSLKLVHPLAIMKNHCFVFTLFIQKQYVTTSLTYRTMSELFQIACIYVEQPKPTRIGSGPIRKLLLTPQDLSFVGYTYKHFDAVKGMHHMGLLSFPPALPAFAINFSFEKNDTGIISFGMLISCNPDLVQNFLSRNCNICLSKSESFEDVKKLVV 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g1077 514 Gene3D Phosphorylase Kinase; domain 1 16 144 - -
Lele19g1077 514 ProSiteProfiles Protein kinase domain profile. 58 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele19g1077 514 ProSitePatterns Serine/Threonine protein kinases active-site signature. 180 192 IPR008271 GO:0004672|GO:0006468
Lele19g1077 514 PANTHER SERINE/THREONINE-PROTEIN KINASE 33 325 - -
Lele19g1077 514 Gene3D Transferase(Phosphotransferase) domain 1 265 315 - -
Lele19g1077 514 Pfam Protein kinase domain 60 211 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele19g1077 514 SMART serkin_6 58 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele19g1077 514 SUPERFAMILY Protein kinase-like (PK-like) 40 305 IPR011009 -
Lele19g1077 514 Gene3D Transferase(Phosphotransferase) domain 1 145 212 - -
Lele19g1077 514 FunFam Serine/threonine-protein kinase cot-1 31 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g1077 Lele-ChrLele19 6975007 6981216 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g1077 14 464 AGC Kinase Gene Family AT4G33080 58.515 7.83e-168 483
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Lele19g1077 Pkinase 4.6e-37 CL0016