Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g1073 ATGAGATCAGTTGCCGTTGCTGTCAACGGTGGCTCCAGCGCTGGCAGAGGTAGCCTGCGAGCCGTCCAGTGGGCGGTGAAGAATCTCGTGCCTCAAGCCGATAGGTTCATCTTAGTTCACGTTATGCCCAGAATCGCTTCAATTCCAACCCCATATGGAGAGTGTATCCCTGTTATGGATCTAGACCCCAATGTGGCAGCAACTTACATTAAGGATGTAAAGGAGAAGTTCGAGCGAATCTTCGTTCCATTCCAGAAACTCTGCAAAGCAAGCACAGTTGAAACTTTGTTGCTGGAAGATGACAATCCTGCAACTGCACTACTTAGATATATATCAGAATCAGAAATTCAAATATTAGTGTTGGGAACTGATTCTTCCAATTTTATAACAAGGAAGCTAAAAGGGCCAGGGATATCAACAGATGTTCTAAGATGTGCTCCTGACACTTGTGACGTATATCTTGTAGCCAGAGATAGAATTATATCAAAATTAGCTGATTCTTCATCACCCTCACGTGAGACTAGCTCTAGGTACTCTCTGTCTACACAAGGGAATCCAGGAGATGCCGATGCTCACTTTGGTAGAGAAATAACTGGACTTAATTCTTGCATAACAGGACCTGAATTTCTCCCAAACATATTCCCATCAATGTCAGAGTGGAGTTATATAGGTTCTCAAACATCTAGTCCTGCAAATTCTCTTACAAATCCCACTATAAATGAAGGCGATCTAGAAAGCTTTCGAGATGATGCTGAAACTGCAAGCATCCGCTCATTCGATTCCACAGCTTCTGCACAAATTGAACAACCAGTCATGCAAGAAGTTGAGCAGCTGCAGCTGGAATTACGGAATACTATTGCTATGTATAAACAGGTTTGTGAAGAGTTGGCTCTTTCTCAAAGTAAGGCTCATTTACTTTCAGCTGAATATATTGAAGAATCGAGAAGAGTAAATGATTTCCTGAAAAGAGAGGAGACTTTGAGAAAGATTGCTGCTGGAGAAAAAGAAAAGTATTTGAAAGTCATGAAGGAACTCGAGGAGGCAAAAATTAAGTTTGCGAAAGAGTCATATGAAAGGCAGATAGCTGAACTTAATGTTATGAAGGAGTCTGTAGAAAGGAAGAGAATAATTGATACCATGCTCTCAAGTGACAAGAGGTACAGAAAGTACACTATGGATGAAATTAAAGAAGCGACAATCGACTTCTCTAAGGATCTTTTAATTGGTGAAGGAGGTTATGGGAAGGTTTATAAGTGCAGCCTTGATCACACTACAGTAGCTGTAAAAGTTCTTCACGAGGATGCAATGAACAAGAAAGAGGAGTTTCTGAAAGAGGTTGAGATTCTGAGTCAGCTACACCATCCACACATGGTTTTGCTGCTAGGAGCCTGTCCTGAAACTGGCTGCCTTGTTTATGAATACCTGGAAAATGGAAGCCTTGATGACTATCTTTTCAATAATAACAGTGGGAAACCGCCACTTCCTTGGTCCATTCGATTCCGTATAGTTTTTGAAGTGGCTTGTGGGTTATCATTCTTGCATAGTTCAAAGCCTGAGCCAATCGTTCATCGAGATATGAAACCGGGAAATATCTTGTTGGACAGAAACTATGTGAGCAAAATTTCAGATGTTGGATTGGCTAAACTCATTTCAGACGTCGTACCTGACAACATCACTGAGTACAGAGAATCTGTGCTTGCTGGGACTCTGCATTACATGGATCCGGAGTATCAGAGAACTGGTACGGTCCGACCAAAATCAGATGTATATGCCCTGGGAGTTATAACTCTTCAATTGATAACTGCTCGCCATGCACGCGGACTCATTTTGGCCGTTGAAAATGCACTTCAAAACGGCTCCTTCTCTCATATTTTAGATAAATCAGCTGGAGATTGGCCACTGACTGAGACAGAAGAGTTGGCTCAAATTGCCCTAAGATGCTCGGCACTGAGATGCAGAGATAGACCAGATCTTGATACTGAAGTTCTTCCACTGCTCAAAAGAATCTGTGATGTGGCAAATGCTACTGTAGAAGTGGGAAGAAATAGTAGAATAGGCCCACCAAGCCAATATTATTGCCCAATCCTTCAGGAAATAATGGACGATCCACATATTGCCGCGGATGGTTTTTCCTACGATTACAGAGCAATCAAGGCATGGCTCAGCAAACATAATGTATCACCTGTAACTAAGCTTACAATGCGGCATTCTACATTGATTCCAAACCATACCTTACGTTCTGCCATTCAGGAGTGGAGATCAGGACAAAAGTGA 2274 0.4213 MRSVAVAVNGGSSAGRGSLRAVQWAVKNLVPQADRFILVHVMPRIASIPTPYGECIPVMDLDPNVAATYIKDVKEKFERIFVPFQKLCKASTVETLLLEDDNPATALLRYISESEIQILVLGTDSSNFITRKLKGPGISTDVLRCAPDTCDVYLVARDRIISKLADSSSPSRETSSRYSLSTQGNPGDADAHFGREITGLNSCITGPEFLPNIFPSMSEWSYIGSQTSSPANSLTNPTINEGDLESFRDDAETASIRSFDSTASAQIEQPVMQEVEQLQLELRNTIAMYKQVCEELALSQSKAHLLSAEYIEESRRVNDFLKREETLRKIAAGEKEKYLKVMKELEEAKIKFAKESYERQIAELNVMKESVERKRIIDTMLSSDKRYRKYTMDEIKEATIDFSKDLLIGEGGYGKVYKCSLDHTTVAVKVLHEDAMNKKEEFLKEVEILSQLHHPHMVLLLGACPETGCLVYEYLENGSLDDYLFNNNSGKPPLPWSIRFRIVFEVACGLSFLHSSKPEPIVHRDMKPGNILLDRNYVSKISDVGLAKLISDVVPDNITEYRESVLAGTLHYMDPEYQRTGTVRPKSDVYALGVITLQLITARHARGLILAVENALQNGSFSHILDKSAGDWPLTETEELAQIALRCSALRCRDRPDLDTEVLPLLKRICDVANATVEVGRNSRIGPPSQYYCPILQEIMDDPHIAADGFSYDYRAIKAWLSKHNVSPVTKLTMRHSTLIPNHTLRSAIQEWRSGQK 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g1073 757 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 374 474 - -
Lele19g1073 757 PANTHER OS02G0152300 PROTEIN 4 751 - -
Lele19g1073 757 SMART Ubox_2 690 752 IPR003613 GO:0004842|GO:0016567
Lele19g1073 757 MobiDBLite consensus disorder prediction 166 186 - -
Lele19g1073 757 ProSitePatterns Protein kinases ATP-binding region signature. 408 429 IPR017441 GO:0005524
Lele19g1073 757 Coils Coil 275 295 - -
Lele19g1073 757 ProSiteProfiles Protein kinase domain profile. 402 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele19g1073 757 Gene3D Phosphorylase Kinase; domain 1 380 474 - -
Lele19g1073 757 ProSitePatterns Serine/Threonine protein kinases active-site signature. 521 533 IPR008271 GO:0004672|GO:0006468
Lele19g1073 757 ProSiteProfiles U-box domain profile. 686 757 IPR003613 GO:0004842|GO:0016567
Lele19g1073 757 Pfam U-box domain 688 755 IPR003613 GO:0004842|GO:0016567
Lele19g1073 757 SUPERFAMILY Protein kinase-like (PK-like) 384 659 IPR011009 -
Lele19g1073 757 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 687 757 IPR013083 -
Lele19g1073 757 Coils Coil 335 374 - -
Lele19g1073 757 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 1 157 - -
Lele19g1073 757 SMART serkin_6 402 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele19g1073 757 Gene3D Transferase(Phosphotransferase) domain 1 475 673 - -
Lele19g1073 757 CDD STK_N 3 157 - -
Lele19g1073 757 SUPERFAMILY RING/U-box 685 753 - -
Lele19g1073 757 Gene3D HUPs 1 161 IPR014729 -
Lele19g1073 757 MobiDBLite consensus disorder prediction 166 190 - -
Lele19g1073 757 CDD RING-Ubox_WDSUB1_like 691 731 - -
Lele19g1073 757 Coils Coil 432 452 - -
Lele19g1073 757 Pfam Protein tyrosine and serine/threonine kinase 407 659 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g1073 Lele-ChrLele19 6945996 6951488 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g1073 3 754 Plant U-box Gene Family AT5G57035 52.964 0.0 809
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Lele19g1073 PK_Tyr_Ser-Thr 1.6e-41 CL0016