Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g1070 ATGTTGAGCGCCGATCTTCCTGAAGAAATTCTCGATGAGATATCGATGAGGCTTCCTGTGAAATCCCTACTTCGATTCAAATCCGTGGCGAAATCCTGGTACGCACAAATCACTAATCCGTCTTTTATAACCAGACAATTCGAATGGTCTGATTCAATCACCGAAAACCGCCGCCATCAGCTGATTTTCCGATTGCACAATGTCACTCTTAAGCCTTGCATTTCTCTGATTTCCAATTGCCAGGAACCAAATGATATTGAATTGCCATTTCCTGAGAAAGATGTGGAATACATATTCGTTTATGGTCAATGTAATGGGATTTTCTGTCTCTATGGAGTTCATGGAGGAGACAAATCTGGTGGTGCCACCTTGATTCTGTGGAACCCAGGAACAAAAGCGGTGAGGGTTCTTCCTGCATCTAAGAACCAACCAAAAGACATGGTTTATATCATATTTGGGTTTGGGATTGATCCAATTACAAATGATTTTAAGGTTGTTCGATTTGGGAATTTGGCTTTTGAAGGAAGAGAACAACCTCCAGTTGAGGTATATGATCTGAATACTGATTCATGGAGAACCATTGATGTTGTTGTCCCTGCTTTTCGATTGTGCTATCCAAAATGTAGGGCTTATTTGAATGGGATTTATCACTGGTTAACTGATGATAACAATGATAAGGCCATTTTGTCCTTTGATTTCAGCAAGGAAGTGTTTGGGAAGATTCAATTGCCTCCTGAAATTGAACACTCTCATGAATCAAATATTGCTGTGATTGATGAGAAACTTGCTTGTATTGCTACATATTACATCAACAATCATATATTCGAAATCTGGGTGATGAGTGAGTACGGTGTTGAGAGTAGCTGGGGTAAGAAATTTGTTATTGGACCACGCCCGGAATTTGGATCATTTTTAGGGCTTTGGGGTGAGGATGAGATTCTTGTTGAAGATGCAGGTCAATTGATTTCATATAATTTTAAGAATCAGCAAATACAGAGGTTTGAAATCCGTGGAGTCCCAAAACTGTTCAAAGTGTTTGGCTATTTGGAAAGCTTGGTTCCTCTGAAGAACAAAGAATATTAG 1083 0.3952 MLSADLPEEILDEISMRLPVKSLLRFKSVAKSWYAQITNPSFITRQFEWSDSITENRRHQLIFRLHNVTLKPCISLISNCQEPNDIELPFPEKDVEYIFVYGQCNGIFCLYGVHGGDKSGGATLILWNPGTKAVRVLPASKNQPKDMVYIIFGFGIDPITNDFKVVRFGNLAFEGREQPPVEVYDLNTDSWRTIDVVVPAFRLCYPKCRAYLNGIYHWLTDDNNDKAILSFDFSKEVFGKIQLPPEIEHSHESNIAVIDEKLACIATYYINNHIFEIWVMSEYGVESSWGKKFVIGPRPEFGSFLGLWGEDEILVEDAGQLISYNFKNQQIQRFEIRGVPKLFKVFGYLESLVPLKNKEY 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g1070 360 Pfam F-box associated 211 299 IPR006527 -
Lele19g1070 360 Gene3D - 4 42 - -
Lele19g1070 360 SUPERFAMILY F-box domain 5 52 IPR036047 GO:0005515
Lele19g1070 360 SMART fbox_2 6 45 IPR001810 GO:0005515
Lele19g1070 360 Pfam F-box domain 5 42 IPR001810 GO:0005515
Lele19g1070 360 ProSiteProfiles F-box domain profile. 1 46 IPR001810 GO:0005515
Lele19g1070 360 TIGRFAM F_box_assoc_1: F-box protein interaction domain 102 303 IPR017451 -
Lele19g1070 360 PANTHER BNACNNG10540D PROTEIN 5 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g1070 Lele-ChrLele19 6923405 6924487 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g1070 182 305 Carbohydrate Esterase AT1G25141 28.676 6.52e-08 51.2