Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g1065 ATGGACGGAGTTCTGAGTTATGAACTTTGCAACAAAACGTGTACTTCGCGTTGCGGCAGTATCACAAACATCTCATACCCATTCCGATTACCACATGACCCACCCCACTGCGGCCGCCATGACTACCAGCTAGAGTGTGAAAACAACGTCACTCTCCTTCAATTACAAGATCATTATACTGATTATACTAATGGTTCGTATATTGGAAAACACCGGGTGGTGGGAACATATAGGGTGCTGGGAATAAACTACAACAACTTCACAATCAGACTCGTAGATGAAGGCATTCAGAAGGGCAATTGCTCCTCCCTCCCTCTCTATTCCTTACTCCTTTCCCATTACTCTGGCGTGTATCTTTACGACTATTATAACTATTTCAATCGTACTCTAAACAGCGACGGGACATTACCTACAATAGTCAAACATGTGGCGTACCTGAACTGCAGCTATCCAGTGAGGGACGACGCAGAGTATGTGGATACGGCTCCCTGCGTGAATTGGGAAGGAGGAGGCCATGTTTATGCGGTGGCTGGAGACTTGCTGGCTGACCAGTTTAAACCTCAGTGTCGTCTGAAATCGGGGGCCCCCATAGCCTCAGATTGGGAATCAATGGTGGCTGGTGGAAGAATCAAGTCCTACTCCGATATTCACACTCTGCTTTCCTCTGGATTTGAGCTCTCATGGATGAGTCAAGCTTGTGATGATCTTCATTGTGAGAATTACAATGACTGCGATTTCATCCCTGGAACTTTCAGTCTCGAATGCAGAGGTGAAAAAGAGCTTAGAAGATGTAGGAGTCCCACGGGAATAACCGAAGCAATTAAATGTAGTAATTTTTCCAAGCTGCGCATATTGGCGGAAGATTATCTTTATGGAATGGAAAAAGGAATGTTCCAATTAGCAAGGAAGGGTATAAACCCTCACCACCATGACACCGATTTCATTCTAACAATTCCTGCAATCAAATTGGGACTAATTACTGCAGAAGTTGTTGTGCCATACATCCTTGTCAGAGTTTTATTTGGTATCATATTCCTATCTTCCTTGTTGATTTATACATTCCGCAGAAGACACTTATCAATGTATGAAAACATTGAAGATTTCATACGACTTCACAACCTCCTTCCATTAAGGTACTCCTACAAGGATTTGAAGACAATGACCGAAGGTTTCAAGGCTAAGTTAGGTGAAGGAGGATTCGGCACTGTATACAAAGGCAAGTTAAGGAGTGGTTCTGATGTTGCTATCAAAATGTTGGGCAAATCCAAAGCTAATGATTGCCAAGAATTTATCAGTGAAGTGGCAACTATTGGGAGGATTCACCATGTAAATGTGGTACACCTTGTTGGATTCTGTGTGGAAGGAACAAAGCGAGCTCTTGTCTATGAATTCATGCCTAATGGCTCTTTAGATAAGTATATCTTTTCAAAGCAGGAAAGCTTCTCCTTGAGTTATCACAAGATATATGAGATATCTCTTAGAGTAGCTTGTGGGATTGCTTACCTTCATCATGGTTGTGACATGCAGATATTACATTTTGATATTAAGCCCCACAATATTCTACTTGATGATAATTTCAATCCAAAGATTTCAGATTTTGGACTGGCAAGACTGTATTCTTATGATGATAGTATTGTCACTTTAACTGCAGCAAGAGGGACAATAGGATACATGGCTCCTGAGTTATTTTATAAGAATATCGGAGGAGTGTCTCATAAGGCTGATGTTTACAGTTTTGGAATGCTTTTGATGGAGATGGCAAGCAGAAGAAGGAATATGAATCCACATGCAGAACATTCAAGTCAACTTTATTTTCCATTATGGATTTATGACCAATTTGATGATGATGATAAAGATATTGAAATGGAAGATTTGACGGAAGAAGAAAAGGATTTAGCTAAGAAAATGTTCATAGTAGCACTTTGGTGTATACAGTTAAAACCTGTTGATCGTCCTTCAATGAACAAAGTGATAGAGATGTTAGAAGTAGAAGATGCTTCAAGTCTTGAAATGCCTCCAAAACCATCTCTATATCCTAATGAGAGAGTTTTAGTCGACGACGGATCCAACTCCAACCAAGAAACATCCACTATCTCTATCCATTCTCATAGTAGTGCAGATGAGATCACAAGCGAAGGGAAATAA 2145 0.407 MDGVLSYELCNKTCTSRCGSITNISYPFRLPHDPPHCGRHDYQLECENNVTLLQLQDHYTDYTNGSYIGKHRVVGTYRVLGINYNNFTIRLVDEGIQKGNCSSLPLYSLLLSHYSGVYLYDYYNYFNRTLNSDGTLPTIVKHVAYLNCSYPVRDDAEYVDTAPCVNWEGGGHVYAVAGDLLADQFKPQCRLKSGAPIASDWESMVAGGRIKSYSDIHTLLSSGFELSWMSQACDDLHCENYNDCDFIPGTFSLECRGEKELRRCRSPTGITEAIKCSNFSKLRILAEDYLYGMEKGMFQLARKGINPHHHDTDFILTIPAIKLGLITAEVVVPYILVRVLFGIIFLSSLLIYTFRRRHLSMYENIEDFIRLHNLLPLRYSYKDLKTMTEGFKAKLGEGGFGTVYKGKLRSGSDVAIKMLGKSKANDCQEFISEVATIGRIHHVNVVHLVGFCVEGTKRALVYEFMPNGSLDKYIFSKQESFSLSYHKIYEISLRVACGIAYLHHGCDMQILHFDIKPHNILLDDNFNPKISDFGLARLYSYDDSIVTLTAARGTIGYMAPELFYKNIGGVSHKADVYSFGMLLMEMASRRRNMNPHAEHSSQLYFPLWIYDQFDDDDKDIEMEDLTEEEKDLAKKMFIVALWCIQLKPVDRPSMNKVIEMLEVEDASSLEMPPKPSLYPNERVLVDDGSNSNQETSTISIHSHSSADEITSEGK 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g1065 714 Gene3D Transferase(Phosphotransferase) domain 1 465 671 - -
Lele19g1065 714 SMART serkin_6 389 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele19g1065 714 Gene3D Phosphorylase Kinase; domain 1 374 464 - -
Lele19g1065 714 ProSitePatterns Protein kinases ATP-binding region signature. 395 417 IPR017441 GO:0005524
Lele19g1065 714 FunFam PR5-like receptor kinase 465 673 - -
Lele19g1065 714 FunFam serine/threonine-protein kinase PBS1-like 359 464 - -
Lele19g1065 714 PANTHER RUST RESISTANCE KINASE LR10-RELATED 362 688 IPR045874 GO:0004672
Lele19g1065 714 MobiDBLite consensus disorder prediction 669 714 - -
Lele19g1065 714 ProSitePatterns Serine/Threonine protein kinases active-site signature. 510 522 IPR008271 GO:0004672|GO:0006468
Lele19g1065 714 ProSiteProfiles Protein kinase domain profile. 389 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele19g1065 714 Pfam Protein kinase domain 392 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele19g1065 714 Pfam Wall-associated receptor kinase galacturonan-binding 14 93 IPR025287 GO:0030247
Lele19g1065 714 MobiDBLite consensus disorder prediction 685 706 - -
Lele19g1065 714 SUPERFAMILY Protein kinase-like (PK-like) 373 663 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g1065 Lele-ChrLele19 6893461 6899260 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g1065 4 678 Receptor kinase-like Gene Family AT5G38260 33.526 1.89e-102 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Lele19g1065 Pkinase 8.5e-49 CL0016