Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g1035 ATGGGGCGCAACGATGGAGAAATGGAACTTGGCTTCCCAAACATGTCTCAAGATGATATTCAAACAGCACTGAGGAATTGGTTCCCAGATGAATTTTCCAGATTACAGTCGTCATCGTCAAATCAACAGCAGGCAAACATGGATCAGAGTCATCAGAATCCACCTTCATCATCTTCATCTTCATTAAGATCTCTCTCACTATCTGCAGGAAGCCCTGAATACTCATCCCTTCTGTTCATTCCGGGATCTTCTCCTCATTTTCCTCCTCCTCTTCAAGATCAATCCCTCACAACAGCTTCTTCTTCTAGCCTAATACACCAGCAAGTAGTCATCCAAGCACTAGCTCAAGCCACAGCAGCACAGAGACCATTTCCCACTCCAGAGACTGAAAATGATGCTATCATGAGAGCAATCCTTCATGTCCTTTCTACTAATAATGATTCACCTTCTTCTTCAACCTCCCTTTATCATCATCAACAAAATTTGCATAATTATATGGTTCATCCTGAGACTAGTGCCTTCAAGAGGTACAACCCCATTCTCCCCCAAATGGGACCTGCAGATCAATTGCGCAGGCAAAGTTTCTTCAAGAGGTCATTAACGTTCTTTAGAGGATTGAATTTCATGAGAAAGAGAGAACGCATTCAAACAACTCGCCCCAGCACCACACAGCTCCATCACATGATTTCAGAAAGAAGAAGGCGTGAAAAGCTTAACGAGAACTTTCAGTCTCTTAGATCACTTCTTCCTCCTGGAACCAAGAAAGACAAAGCATCAATACTTACAACAGCGAAGGAAATACTGAGCTCGTTAATGGCGGAGGTAGAAAAGCTTAGAGAGAGAAACAAGCAGCTGGAGGCAGCAACAAAATCGTCATCAATGGCGGCTGCTCCACCAGCTGTGAAAGAAGCAAGTGATTATGATGATCATGAAATCGTAAATGAAAGGTTAAATGTGAGAACCTCAGGCAAATTACCATCAGAATCAAGGTCGTCGGAAGAGAGAATGGTGGATTTGGAAGTGACTGTGAGAGGACAAAGTTCTCAAGTTGATATTCTGATTCGATTACTGGGATTTCTGAAACAGGATCAAAATTTGAGCTTGATTTCCATGGAAGCTAACACGCATTTAGCTCACGCCACTTCCTTCAATCGAATCACCATAAGACTGAGGGTTGAGGGAAGTGAATGGGACGAATCTGCCTTCCAGGAAGCAGTGAGAAGAGTGGCTGCTGACCTGGCACAGTGA 1248 0.4359 MGRNDGEMELGFPNMSQDDIQTALRNWFPDEFSRLQSSSSNQQQANMDQSHQNPPSSSSSSLRSLSLSAGSPEYSSLLFIPGSSPHFPPPLQDQSLTTASSSSLIHQQVVIQALAQATAAQRPFPTPETENDAIMRAILHVLSTNNDSPSSSTSLYHHQQNLHNYMVHPETSAFKRYNPILPQMGPADQLRRQSFFKRSLTFFRGLNFMRKRERIQTTRPSTTQLHHMISERRRREKLNENFQSLRSLLPPGTKKDKASILTTAKEILSSLMAEVEKLRERNKQLEAATKSSSMAAAPPAVKEASDYDDHEIVNERLNVRTSGKLPSESRSSEERMVDLEVTVRGQSSQVDILIRLLGFLKQDQNLSLISMEANTHLAHATSFNRITIRLRVEGSEWDESAFQEAVRRVAADLAQ 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g1035 415 SMART finulus 228 277 IPR011598 GO:0046983
Lele19g1035 415 Pfam Helix-loop-helix DNA-binding domain 226 271 IPR011598 GO:0046983
Lele19g1035 415 MobiDBLite consensus disorder prediction 31 67 - -
Lele19g1035 415 MobiDBLite consensus disorder prediction 286 308 - -
Lele19g1035 415 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 222 271 IPR011598 GO:0046983
Lele19g1035 415 PANTHER TRANSCRIPTION FACTOR BHLH041-RELATED-RELATED 40 412 IPR044658 -
Lele19g1035 415 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 223 290 IPR036638 GO:0046983
Lele19g1035 415 Coils Coil 261 288 - -
Lele19g1035 415 MobiDBLite consensus disorder prediction 21 67 - -
Lele19g1035 415 Gene3D - 221 295 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g1035 Lele-ChrLele19 6654542 6658282 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g1035 1 414 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G56960 40.716 2.08e-64 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele19g1035 HLH 6.6e-11 No_clan