Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g1032 ATGCGATCTTTTGTTCCGCCCAAGCTTCCCCGGCTTCTATTCTCCATAGATTTGCCGCGCCCCTGGACTTCGCGCTTCCCCCTCTACTTAGACATTCTTCTCCTTCGACTACCAGCTGTGTCCCAGAGCAGAACACAACCCACCTGCCCTTCCTCCGACTCCGAGTTTCTCCTCCTCCATGGACCGTCGTGCAATGAGTGCATTCTACCTGGCACCAATGGAAATCATGCTGCTTCTCAAGAGATACAAAATCATGACAATGGCGTCGATAGATTGCGGCAAGAGAGCCAGGGAAAGGAGCCTGAGAACTTGCAATTTTCTGGTACTGATCTTATGAATCCCAAGCATCCTGTATCCCATAAGGGAAAGCAGGTTCATGAGAGCTCCGATTGTAGGGAGTTTATGATGGGAGTAGAGGAAGATGTGGGCTCTACTGGAAGGCAGGATATGTTGATATGTGAAAGAGAAAGTGTTGAGGCCTTGTCCATGGGAACTAATGGTTTGAATAAGGAACAGAAGATAATAGACGAGTTAAATCAAAACCTGGTTGACAATGGCTCAATTCCTTTGAACTTGGGATCAGGTGTAAACCAGAATGGAAGCAGTGAAGTTGACTTGATGGATTACCAAGTAGAGTATGTTGAATTTAGAGGATCCGATATCAACCCATCTGGAACTGAAAGTGAGTTATATAAAGAAGGAGAATTTAATCAAAATATCTCCGAAGGCTTTGATGCATCTTTAATTGCTACAGAAGGTGAGTTTGAGAAGGAAGAACGTGGTCAAAAGGTTCATGTGGCAACACACCTTTCTCTAGATGATACTATGAAATATAGCGAACAGTTGAATTTGAGTATTGAGCTCGAGAGACTACAAAAGGAAATGGAGCTGGTGAAACCTGTTTCAGCTGCAGTTGTTTCTCTTCCTACTACTGAAGATGTTAAGTTTGAGCAGGAAGAACAACATGGTCAAAAAGTATTTGAGGCTTTGCAATTTTCTGTAGATCAGGTTATGAATAATGAAGAATCAAATTCAAGTGTAGAGCATGAGAAACAGAAAAGGGAAATAGACTCAGCAAAACCAGTTTGTGCCACAATGATTTCTCTTCCTACCACTAAAGAGGGTGAGTTTGAGAAGGAAGAACAACATGGTCAAAAGGCTTCTGAAGTAATGCGTATTTCTGTAGATCAGGCTATGAAGAGTGAAGCATTGATTTCAAGCATAAAGCCCAATAGAAAACAAAAGGAAATGGAAATGGTGAAACCTGTTTCTGCTGCAATTATTTCTCTTCCTACTACTGAAGATGGCGATTTTAAGAAGGAAGAACAGCAGAGGCAAAGGATTCCTGAAGCAATGCAATTTTCTAAATATCAGGATATGAATAATGAAACATTAAAGTCACATATAAAGCTTGAGAAACAACAAAAGGAAATGGACTCATCGAAATCAGTTTGTGCTGCTATTGTTTCTCTTCCTACTACCAAAGAGGGTGAGCTTGAGAAGGGAGAACAACATGGTCAAAAGGTTCCTGAAACAATGCACATTTCTGTAGATCAGGCTATGGATAATGAAGCATTGATTTTAAATAGAAAGCCTAAAAGACAACAAAATGAAATGGAATTGGCAAAACCTGCCTGTGCTTTAATTGTTTCTCTTCCTGGTATTGAAGAGGATGAACTAGAGAAGGAAGATCATAATGGTAGTGATGGTTCCAAACCCACTAAGACATATGCAAGGAAGATTAAGAAGAGGGATTTGGGCCACACGGGCTTGGACCCATCAGGTAGAATGGTCCCTGAAGCAATGCACTTATTTGTAAATCAGATGAACGCTGAAACATTGAATTTGGGAGAACGCAGTGAAGAGATATCGTTCATGGACATTGATAGTTTGGATGCTAAACATGTAATACAGCATGATGAAGAGCAGCCAGAAAAGATAACTCACGCAAATGATACAATATTTTCCAATCATCCGGATAAGGAAGAGGACGTTGAAGAGGGAGAACTTTCAGGTGACTTTAGAATGGCTGAGAATTCAATTGATGTGTCTTCTGCAGATTCTTTGATGATAGAACAGAGGAAACATGATGTACATAAGCCCAAACATGTTATGGAAAATATAGTATTTCCTTTTAATATACATAAAGAAGAAAAAGAAAAAAAATATGAATCAACTCAAGATGCCTGTAACAGGGGACAAATGGAACCTACGAAAAGTGATGAAAATGTGTTTCCAAATGGAGTTGACCTTGGAATCTGTCGGGAAATTATTGATTATGGAGATTCAGTGGAGCATGCTTCAGTATTGGTGACTAGAAAAAGTGAAGACAGTGAAATTAAAGGGGCTGTTGGCTTGCCACCAACTTTGGCTAACAAAAAAGTTTTGCCCAAAGGTGTCTTGGAAGAAGCCACTGAAAATCATCAAAACACATCTGCAGGAAAGTTGTTTGCTTGTATGACCACTGTGGCTGATCATTTGCAACAGAAAGCTGGCATCAGAAAAGAAAAGAAAGCAGATGGCAGAGAAGAACAGAAACTTGGTGTTAAAAGGTTGAAGTTGCAGCCAGTACAGAAACCAAAAACTATCACACATTGCCGCCATTATCTGAAGGGAAGGTGCCACGAGCCATGCTGTCATTTTGCTCGCCACTCTTGCATGAAAGGTGATGACTGTCCATTTGATCATGAGCTCTCCAAGTATCCTTGTAGCAATTTTGTGAATAAAGGTTCTTGCAGCAGAGGGAATGCTTGTATGTTTTCACACCAGATGCCAACCAAGCAAGATGTTGCTACATCGTCAAATGATAGCAAAGCTGAGTTGAAGCCTATACCATTAGGAAATACAAAATTGAGTAAGCCACCTAACATCAGCAGCAGCAGTACTTCTCCGCAAAACCAGATCTCTGATTCAAAAGGAATTCAATGTCACCTCAATTCAGAAAAGGTGGTGGCAGACACCGTAAAGAAACCACTGTCAATGGCACCTAAAGGAATTAGTTTCCTCCATGTTTCTAAATCATCATCTCCAAAACAAGTGATGGTAACTCTAAACAAGGAAAGTTCTGTTCAAATTGGGATCCTTACTGGCCAAACTGCATCTGTGGCTTTAAACTCTAAGAATCCTGAGAAAACGCCAGTGGTGGCACCTAAAGGAATTAACTTCCTTTCATTTGGAGAAGGTACGCCTGAACAAGCATCTCTAGAGAAGGATGATTGCAGTAAAGTTGGCAGTGGGACAAAAAGTGTACCGCAGACTGCTGCATGCTCAAACCAGATTTTAAAGCAAAATCAATGTATAGCAGAGAAACAGGATTTGGTTTTTCTAGGAAAAGCTTCAATAGATCATTTCAGTAATGATGTACAATTTAGCTCAACCTCTCATCAGGATTACAGTCTTAGTAGATCAGTACAAGAGGGAATAAAGGCATATACTCCTCAGTCTTCAACTCTGACCTCATCAATGCTTCCAACTTCTTCACTTGTTTCAGGTCAATCTTCAGAACGCCTAGCATCTAGACATCATAAGCACGGCTTGCAGATCCTTATGGCAACAAATTTGATGAGCAATTTCTCACACTCTTCTCAACATGAGATGAATGCAAATAGATGA 3612 0.4053 MRSFVPPKLPRLLFSIDLPRPWTSRFPLYLDILLLRLPAVSQSRTQPTCPSSDSEFLLLHGPSCNECILPGTNGNHAASQEIQNHDNGVDRLRQESQGKEPENLQFSGTDLMNPKHPVSHKGKQVHESSDCREFMMGVEEDVGSTGRQDMLICERESVEALSMGTNGLNKEQKIIDELNQNLVDNGSIPLNLGSGVNQNGSSEVDLMDYQVEYVEFRGSDINPSGTESELYKEGEFNQNISEGFDASLIATEGEFEKEERGQKVHVATHLSLDDTMKYSEQLNLSIELERLQKEMELVKPVSAAVVSLPTTEDVKFEQEEQHGQKVFEALQFSVDQVMNNEESNSSVEHEKQKREIDSAKPVCATMISLPTTKEGEFEKEEQHGQKASEVMRISVDQAMKSEALISSIKPNRKQKEMEMVKPVSAAIISLPTTEDGDFKKEEQQRQRIPEAMQFSKYQDMNNETLKSHIKLEKQQKEMDSSKSVCAAIVSLPTTKEGELEKGEQHGQKVPETMHISVDQAMDNEALILNRKPKRQQNEMELAKPACALIVSLPGIEEDELEKEDHNGSDGSKPTKTYARKIKKRDLGHTGLDPSGRMVPEAMHLFVNQMNAETLNLGERSEEISFMDIDSLDAKHVIQHDEEQPEKITHANDTIFSNHPDKEEDVEEGELSGDFRMAENSIDVSSADSLMIEQRKHDVHKPKHVMENIVFPFNIHKEEKEKKYESTQDACNRGQMEPTKSDENVFPNGVDLGICREIIDYGDSVEHASVLVTRKSEDSEIKGAVGLPPTLANKKVLPKGVLEEATENHQNTSAGKLFACMTTVADHLQQKAGIRKEKKADGREEQKLGVKRLKLQPVQKPKTITHCRHYLKGRCHEPCCHFARHSCMKGDDCPFDHELSKYPCSNFVNKGSCSRGNACMFSHQMPTKQDVATSSNDSKAELKPIPLGNTKLSKPPNISSSSTSPQNQISDSKGIQCHLNSEKVVADTVKKPLSMAPKGISFLHVSKSSSPKQVMVTLNKESSVQIGILTGQTASVALNSKNPEKTPVVAPKGINFLSFGEGTPEQASLEKDDCSKVGSGTKSVPQTAACSNQILKQNQCIAEKQDLVFLGKASIDHFSNDVQFSSTSHQDYSLSRSVQEGIKAYTPQSSTLTSSMLPTSSLVSGQSSERLASRHHKHGLQILMATNLMSNFSHSSQHEMNANR 1203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g1032 1203 MobiDBLite consensus disorder prediction 951 971 - -
Lele19g1032 1203 MobiDBLite consensus disorder prediction 928 971 - -
Lele19g1032 1203 ProSiteProfiles Zinc finger C3H1-type profile. 897 925 IPR000571 GO:0046872
Lele19g1032 1203 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEI 568 1192 IPR045124 GO:0003723|GO:0045892
Lele19g1032 1203 Gene3D - 875 937 - -
Lele19g1032 1203 MobiDBLite consensus disorder prediction 95 128 - -
Lele19g1032 1203 SMART c3hfinal6 900 924 IPR000571 GO:0046872
Lele19g1032 1203 SMART c3hfinal6 873 898 IPR000571 GO:0046872
Lele19g1032 1203 Coils Coil 75 95 - -
Lele19g1032 1203 ProSiteProfiles Zinc finger C3H1-type profile. 872 896 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g1032 Lele-ChrLele19 6625552 6631699 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Lele19g1032 None None None