Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g1031 ATGACTCACCTCTTTCTCCAAAAACGGCATAGCCATTTCTCTTTCACTCTCTCTCTCTCTACCTCTAACACTGGCACTCTCAAGCGGTATAGCAGTGACAAAATGGTGGTTCCTCACGGTGGATCCGGCGGAATCGGCGGTGAGGGTAGGTCAGAATCCATTTCTATAGTTCTATTGAACGAAGCTATGGCAGGAGTAGCACGAGTCAAATCAGAGCAAGTAATGGTGTCCGATGAGGACACCGGTCGTTCTAGTTCTGGTGGCTACTGCGATGTTGAAGGTGAACCACACAACGACTTTTTCAGTGAGCTTTCGGTAAGGAAGAGCTCTCAAGTGACGGATGAGGAGTTTATTGAACCGGTTCCACGGGTTCCCGTAAAGCTTGAGGAACCGGGTGGAGCGGTGGGTGATGTCGATGGCGGTGCTGGAGCTGATGGGTCGTGTTATTCATCGCCAATCTTGTTGCCGAAACCGATGGAAGGGTTGCAAGAGGTAGGCCCACCTCCGTTCCTGAAGAAGACCTTCGAGATGGTTGACGATCCTGTGACCGACCCGATTGTGTCCTGGAGTGAAGCTCGTGATAGCTTCATCGTTTGGGATTCCCATGAATTTTCCAAAATTCTTCTCCCTAAGTACTTCAAACACAGCAATTTCTCGAGCTTCATTCGCCAGCTTAATACATACGGATTTCGGAAGATTGATTCAGACCGTTGGGAGTTTGCGAACGAAGGATTTCAGGGTGGTAAGAAGCATTTGCTGAAGAACATTAGAAGGAGAAGCAAATATAACAAACTGCAACAAGGAGGAGCATTAACTTCCATGAAACCTGGCCTGGAGGCTGAAGTTGATAAACTGAAGAAGGATCAGAACATACTGAAAGTGGAAATTCTGAAGCTGAGACAACAACAAGAGACTTCACAGGTTCAGCTTGTAAATGTTCAAGAACGTGTTCGGTCTGCCGAGTTGAAGCTGTGCCAGATGATGTATTTCCTGACCAAAATGGCCAGAAGACCAACGTTGGTTCAGCAGTTAATCCAGAAGGTAAAGCGAAAAAGAGAGCTCAGTGGGGGCGAGATCAGTAAGCGACCCAGATTGCTTGGAACCCCTTGCCCTGTGGACTTCCCTAAGGCCATGGGCACCAGTCCTGATGTTGATTATAGACAAGGTAATAAGGACTTGGCTTCTTTGCAATCAGAGCTCAATGGACTTTTGTCTGAAACAGTGAACAATAGCAGAATGCAGCCTGCAGCCCATTCTCCTCTGAGAGATGAACTGTGCAGTCCGGAATTAAGGACGAATGCTTCAAGAGCAAGTGGTAACGATGTATCTTCTGCGGCCTGCTGTATGATGTCAGAAAAACTGATGGAAGAGAACTCTGTTGTTGATGAAGGGCTTGATGTGAATGATTCAAATATCTATCTTGAATTGGAGGATTTGATTAGCAAACCAACCGACTGGGTTGGATCTGCAAGTGGATTGGTGGGGCAAACTGGTTGTATCTGA 1503 0.4704 MTHLFLQKRHSHFSFTLSLSTSNTGTLKRYSSDKMVVPHGGSGGIGGEGRSESISIVLLNEAMAGVARVKSEQVMVSDEDTGRSSSGGYCDVEGEPHNDFFSELSVRKSSQVTDEEFIEPVPRVPVKLEEPGGAVGDVDGGAGADGSCYSSPILLPKPMEGLQEVGPPPFLKKTFEMVDDPVTDPIVSWSEARDSFIVWDSHEFSKILLPKYFKHSNFSSFIRQLNTYGFRKIDSDRWEFANEGFQGGKKHLLKNIRRRSKYNKLQQGGALTSMKPGLEAEVDKLKKDQNILKVEILKLRQQQETSQVQLVNVQERVRSAELKLCQMMYFLTKMARRPTLVQQLIQKVKRKRELSGGEISKRPRLLGTPCPVDFPKAMGTSPDVDYRQGNKDLASLQSELNGLLSETVNNSRMQPAAHSPLRDELCSPELRTNASRASGNDVSSAACCMMSEKLMEENSVVDEGLDVNDSNIYLELEDLISKPTDWVGSASGLVGQTGCI 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g1031 500 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 156 387 IPR027725 -
Lele19g1031 500 FunFam Heat shock transcription factor 1 163 260 - -
Lele19g1031 500 SUPERFAMILY "Winged helix" DNA-binding domain 166 259 IPR036390 -
Lele19g1031 500 Coils Coil 386 406 - -
Lele19g1031 500 SMART hsfneu3 166 259 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele19g1031 500 ProSitePatterns HSF-type DNA-binding domain signature. 209 233 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele19g1031 500 PRINTS Heat shock factor (HSF) domain signature 170 193 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele19g1031 500 PRINTS Heat shock factor (HSF) domain signature 208 220 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele19g1031 500 PRINTS Heat shock factor (HSF) domain signature 221 233 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele19g1031 500 Coils Coil 282 302 - -
Lele19g1031 500 Pfam HSF-type DNA-binding 170 259 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele19g1031 500 Gene3D - 163 260 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g1031 Lele-ChrLele19 6616974 6618931 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g1031 156 486 HSF AT2G26150 42.105 9.82e-83 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Lele19g1031 HSF_DNA-bind 1e-31 CL0123