Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g1023 ATGGAAGAGGATAGAACGATATGCAACACAAGTCTGAGTCTAGGGCTTGGATTAGGAGGTTATGCGATGCAACTAAAGAAGCAGAAGTTTGAAGAAGCCATTATTCATAATAATCATCAGAAAGAATTCATCAGTTTGAAGACCAGATCAATCGATGATGATGAAGAAGATGAAAAGAGCGATCATAGCAGAAATAGTTGCAGAAAGAAAATGAGACTCACCAAGGACCAGTCCTCCACGCTTGAAGATAGCTTTAAGCTCCATAGCTGTCTTAACCCATTCCAGAAACAAGAACTTGCTCAGCGATTGAATTTGATGCCCAGACAGATCGAAGTTTGGTTTCAAAATAGAAGAGCGAGGAAAAAGTTGAAGCAAACGGAGGTAGATTGCGAGTTACTAAGAAAATGTTGTGAAAACCTAAGAAACGAGAACAGAAGGTTGAAGAAAGAAGTTGAAGAACTACGTGCTCTGAAAGTTGAAGCGTTGTCGTCGTCGTCTTCATCACCACCACCATTAATATTAGCAGGAAGCAGTAATAACATTAACAAAAGTATTCAAAAACTATCAAGAGCAGCGACACTTGCTCTGTGTTCATCTTGTGAGAAGCCATTAATCAAAGGCCATTAA 627 0.3939 MEEDRTICNTSLSLGLGLGGYAMQLKKQKFEEAIIHNNHQKEFISLKTRSIDDDEEDEKSDHSRNSCRKKMRLTKDQSSTLEDSFKLHSCLNPFQKQELAQRLNLMPRQIEVWFQNRRARKKLKQTEVDCELLRKCCENLRNENRRLKKEVEELRALKVEALSSSSSSPPPLILAGSSNNINKSIQKLSRAATLALCSSCEKPLIKGH 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g1023 208 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 42 202 - -
Lele19g1023 208 Coils Coil 123 164 - -
Lele19g1023 208 Pfam Homeodomain 68 122 IPR001356 GO:0003677
Lele19g1023 208 Pfam Homeobox associated leucine zipper 124 157 IPR003106 GO:0006355|GO:0043565
Lele19g1023 208 SUPERFAMILY Homeodomain-like 58 125 IPR009057 -
Lele19g1023 208 CDD homeodomain 68 125 IPR001356 GO:0003677
Lele19g1023 208 SMART halz 124 167 IPR003106 GO:0006355|GO:0043565
Lele19g1023 208 SMART HOX_1 66 128 IPR001356 GO:0003677
Lele19g1023 208 ProSiteProfiles 'Homeobox' domain profile. 64 124 IPR001356 GO:0003677
Lele19g1023 208 Gene3D - 59 129 - -
Lele19g1023 208 MobiDBLite consensus disorder prediction 51 75 - -
Lele19g1023 208 ProSitePatterns 'Homeobox' domain signature. 99 122 IPR017970 GO:0000981|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g1023 Lele-ChrLele19 6559415 6560528 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g1023 51 202 Homeobox Transcription Factor Family AT4G37790 54.605 2.66e-46 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele19g1023 Homeodomain 6.6e-16 CL0123