Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g1015 ATGTTTGAGAAGCAAGGAGTGGATCATCTTCTTAATAATCATCATCTTCATGATCAGCCATTAATGGTGGGGATGGATCTGATGAAAACCACGAAGAAGAAGAAATCAAGAAGAGGACCGATGACGACGACGACGATGCTGCAACAAGAAGAAAAGCTTGAGATTGTTGATCTTAGTGGCTTGTCTTTAGAATCTCTTCCTAATCCTTCTTTTAATCTAGTCACCATCTCCAACTTGAACCTCTCCAACAACAATCTTCAGAACATACCGGAGTCATTGACGGCGAGATTGCTGAACGTGGCGGTGTTAGACGTTCACTCGAATCAGCTCACGTCGCTTCCTAACTCTATCGGCTGCCTCTCCAAGCTTAAGATATTGGATGTCTCCGGCAACCTCCTTGACTCCTTACCCAAGACCATTGAGAATTGCAGAGCATTAGAAGAACTGAATGCAAACTTCAATAAGCTAACGAAGCTCCCAGAAACCATCGGGTTTGAGCTCATCAACCTCAAGAAGCTATCCGTGAACTCCAACAAGCTTTTGTTCCTTCCTCACTCAACCTCCCACTTAACCGAACTCCGTGTTCTCGACGTTCGCCTGAATTGCCTCCGATCGCTGCCGGACGACCTCGAGAATCTCATTAACCTCAAAACCCTAAATGTTAGCCAAAACTTCCAATACCTAGAAACCCTACCTTACTCAGTAGGGCTCCTCTTATCCCTCGTAGAACTCGACGTCAGCTACAACAGAATCAAGTCCTTGCCGGAATCCATCGGCATTCTCAAGAAGTTAGAGAAGCTAAGCGTCGAAGGGAATCCCTTGACGTCGCCGCCGAAGGAGGTGGTGGAGCAAGGGGTTGATAAAATAAAGGAATATCTGTCTCACAAGTTGAACTCAGTGCATGAGAGTACAAAGAAGAAATCTTGGGTAGGTAAGTTAGTTAGGTATGGAAACAGAAGACGTAGGCATACAGAGGAATTTGCTCTTGGACCTCATTATCGTACCATGGAAGGTCTTGGATCACCAAGGTTAATGACCATGTTCTCTCCAAAGCGTCTCTTTTCACCTCGTCGTTCTGTGTAG 1083 0.4552 MFEKQGVDHLLNNHHLHDQPLMVGMDLMKTTKKKKSRRGPMTTTTMLQQEEKLEIVDLSGLSLESLPNPSFNLVTISNLNLSNNNLQNIPESLTARLLNVAVLDVHSNQLTSLPNSIGCLSKLKILDVSGNLLDSLPKTIENCRALEELNANFNKLTKLPETIGFELINLKKLSVNSNKLLFLPHSTSHLTELRVLDVRLNCLRSLPDDLENLINLKTLNVSQNFQYLETLPYSVGLLLSLVELDVSYNRIKSLPESIGILKKLEKLSVEGNPLTSPPKEVVEQGVDKIKEYLSHKLNSVHESTKKKSWVGKLVRYGNRRRRHTEEFALGPHYRTMEGLGSPRLMTMFSPKRLFSPRRSV 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g1015 360 Pfam Leucine rich repeat 169 224 IPR001611 GO:0005515
Lele19g1015 360 Pfam Leucine rich repeat 77 133 IPR001611 GO:0005515
Lele19g1015 360 SUPERFAMILY L domain-like 52 278 - -
Lele19g1015 360 PANTHER - 97 296 - -
Lele19g1015 360 Gene3D Ribonuclease Inhibitor 28 312 IPR032675 -
Lele19g1015 360 ProSiteProfiles Leucine-rich repeat profile. 75 96 IPR001611 GO:0005515
Lele19g1015 360 SMART LRR_typ_2 238 259 IPR003591 -
Lele19g1015 360 SMART LRR_typ_2 144 166 IPR003591 -
Lele19g1015 360 SMART LRR_typ_2 120 143 IPR003591 -
Lele19g1015 360 SMART LRR_typ_2 261 284 IPR003591 -
Lele19g1015 360 SMART LRR_typ_2 73 96 IPR003591 -
Lele19g1015 360 SMART LRR_typ_2 97 119 IPR003591 -
Lele19g1015 360 SMART LRR_typ_2 167 189 IPR003591 -
Lele19g1015 360 SMART LRR_typ_2 190 213 IPR003591 -
Lele19g1015 360 ProSiteProfiles Leucine-rich repeat profile. 240 261 IPR001611 GO:0005515
Lele19g1015 360 SMART LRR_bac_2 238 257 - -
Lele19g1015 360 SMART LRR_bac_2 120 139 - -
Lele19g1015 360 SMART LRR_bac_2 213 234 - -
Lele19g1015 360 SMART LRR_bac_2 143 162 - -
Lele19g1015 360 SMART LRR_bac_2 261 280 - -
Lele19g1015 360 SMART LRR_bac_2 167 186 - -
Lele19g1015 360 SMART LRR_bac_2 97 116 - -
Lele19g1015 360 SMART LRR_bac_2 190 209 - -
Lele19g1015 360 SMART LRR_bac_2 73 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g1015 Lele-ChrLele19 6504144 6508898 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g1015 68 282 Receptor kinase-like Gene Family AT5G62230 34.389 1.41e-14 73.2