Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g1014 ATGAGGAATAATTATCCCGTACATGACTGGCCGACATGCCTTAGAAATTTCCTGTCATTTCTTGTAGTATCAGATTTCGGTGGCCTTGAAATTCGGACGCGTTTTCAGACGGAGCGAATTTCCGGCATATGTGCGTTTTGGTCCAAGAAGTTCAAAACTCAGTGTAAAACAGGCGAGGTACGGAAGTGTATAAACTGTATCACCTTCTTGACCTTAGCAATGAACAGGGAAAAACTGTTTGATATGATTTCCTTTAGATCAAATTGCTTCAATTCACATGCAACAGCACAATTGGATCCTTCCAGTTCACTTTTCCATTTGAATGTCTCCGATCTTGCCTTTTTCCCACGAATCAATTGTTTATTGGCCTTTCTCTCATCAGAGTCTCTTTCGCTTATTACTGAAACACGTTTGCACAGATGCATAATTCGTATCGTGCTGTTTGAAGAATCGGTTATTTTACTGGAAAAAGTAGACGACGAGGAAGGAGGAAGGAGGAAGGAGGAAGCAGGAAGCAGGAAGGAGGAAGTCAAGAGTCTGAAGAGAAGAGTGAAGACTAGAAGACTTGACTGTTTTCGACAAATGAGTTACTCAAAGGGTTCACCTCGCCATCAAAACGACATAGAGGCGGGGAATAGTCGCTCCGGCGACTTTGATGAAGGGGAGGGTTCGTCCGATCCTTTTGATATTTCCAGTACAAAAAATGCTTCCATTGAACGGCTCAAGCGGTGGAGGCAAGCTGCGCTTGTGCTTAATGCTTCTCGTAGGTTCCGTTATACCTTGGACCTGAAAAAAGAAGAAGAGAAGCAGCAAACATTGAGGAAGATTAGGGCGCATGCACAAGCCATTAGGGCTGCATATCTTTTCAAAAAAGCTGCTGTGCCACCCGTGAATGGGACTCCAACACCACCTCCAGCTACTCCTGGTGACTTTCCAATTGGGCAAGAGCAGCTTGCTTCAATTTCAAGGGATCATAACAGTGATGTCCTGCAGCAATATGGAGGGGTTAGAGGGCTTGCGGAGTCATTGAAAACCAATTCAGAGAAGGGGATTCATGGTGATGATGGTGACTTAATGAAGCGGAGGAATGCCTACGGGTCAAACAATTATCCTCGGAAGAAGCCCAGAAGTTTTTTGATGTTTGTGTGGGATGCTTGCAAGGATCTGACCCTGGTTATATTAATGGTCGCCGCAGTGGCTTCATTGGCACTAGGAATAAAATCTGAGGGTATAAAAGAAGGATGGTATGATGGAGGGAGCATTGCATTTGCAGTTATTCTTGTCATTGTGGTTACTGCTATAAGTGATTATAAGCAGTCTCTTCAGTTTCGTGATTTAAATGAGGAGAAGAGAAATATACATCTAGAGGTTATAAGAAATGGTAGAAGAGTTGAGATCTCAATCTATGATATTGTTGTTGGTGACGTGATACCTCTGAATATTGGTGACCAGGTCCCTGCTGATGGAATTTTGATAACTGGTCACTCTCTTGCAATTGATGAATCAAGTATGACTGGCGAGAGCAAGATTGTTCACAAGGACTCAAAGAACCCCTTTTTGATGTCTGGATGTAAAGTTGCAGATGGCAGTGGCACTATGCTTGTTACAGGTGTTGGCATTAATACTGAGTGGGGGCTTTTAATGGCTAGTATATCAGAAGACACTGGTGAAGAAACACCCTTGCAGGTACGCTTAAATGGTGTTGCCACCTTCATTGGTATCGTTGGACTAACTGTGGCTGCTGCTGTTCTGGTTGTGCTACTGGTCAGATATTTTACTGGCCATACTGAAAACTCAGATGGAAACTCTCAGTTTAGGGCGGGCCATACGAAACTGGGTACTGCTATTAACGGAGCAATTAAGATAGTCACAGTTGCCGTCACCATTGTAGTGGTTGCAGTGCCTGAAGGGCTTCCTTTAGCAGTTACCTTAACACTTGCCTACTCGATGAGAAAAATGATGGCAGATAAAGCTTTGGTGAGGAGGCTTTCGGCCTGTGAGACAATGGGTTCTGCCACAACCATTTGCAGTGATAAGACTGGAACATTGACTTTGAATGAGATGACTGTGACAGAAGCTTACGTTGGGGGGAAGAAGACTGATCCTCCTCACAACAAATCTGAGCTCGCGGATAAGTACTGCTCTTTGCTTGTTGAAGGTGTTGCCCAAAACACCAATGGCAGTGTTTATGTACCTGAGGTTGGTAAGAGTGTTGAGGTCTCTGGATCACCGACGGAAAAGGCAATTTTGAAATGGGGAATTCAGCTTGGGATGGATTTTGAGGCTGTCAGATCAGAGTCATCAATTATACACGTATTTCCATTCAATTCAGAGAAAAAACGTGGGGGAGTCGCAGTGAGGAAGCCTAACTCTCAAGTTCATATACATTGGAAAGGTGCTGCTGAGATAGTACTGGCCTGCTGTACAGCATATTTGGATGCAAATAACCAGTCAGTAGAGATGGATGAAGAGAAGATGACATATTTTAAAAACGCTATTGAAGACATGGCTGCTGAGAGTCTTCGTTGTGTTGCCATTGCATATAGATCTTATGAAACAGAGAAAGTTCCTAGTAGTGAAGAAGAACTTGCTCGCTGGTCATTACCTGATGATGATCTTGTTTTATTGGCTATTGTTGGTCTGAAGGATCCTTGTCGATATGGTGTCAAGGATGCAGTGCAACTTTGCCAAAAAGCTGGAGTGAAGGTGCGAATGGTCACCGGGGACAATGTGCAAACCGCAAGAGCAATTGCTCTGGAATGTGGAATACTTGGTTCATCTGCAGATGCCAAGGAGCCAAACATTATTGAAGGCAAAAGATTTCGGGAGTTATCAGACTCGGAGAGAGAGGATATTGCAGAAAGGATATCGGTTATGGGGCGGTCTTCTCCCAATGACAAGCTTTTGCTTGTGCAAGCCTTGAGAAAGAAGGGGCATGTTGTTGCTGTAACTGGGGATGGAACTAATGATGCTCCTGCACTGCATGAGGCTGATATAGGTCTTGCAATGGGCATCCAAGGGACAGAAGTTGCCAAGGAGAGCTCTGATATCATCATTTTGGATGACAATTTTGCATCCGTTGTGAAGGTTGTTAGATGGGGACGGTCTGTATATGCAAATATCCAGAAATTTATCCAGTTTCAGCTTACAGTAAATGTGGCAGCTCTTGTAATTAACGTTGTTGCTGCTGTTTCTTCCGGTGATGTCCCGCTGAATACAGTGCAGCTTCTCTGGGTGAATTTGATTATGGATACACTGGGAGCACTTGCCTTGGCAACAGAACCACCAACTGATCACCTAATGGATCGATCTCCTGTGGGCCGAAAGGAACCTCTCATAACGAATATAATGTGGAGGAATTTGCTCATACAGGCAATATACCAAATATCTGTTTTGCTGGTACTCAATTTCCAAGGCAGGACCTTACTGGGTCTAAAGCATGAAGAGTTCACCCATTCTCTCAGAGTGAAGAACACTTTAATATTTAATGCATTTGTTTTCTGTCAAATCTTTAATGAATTCAATGCTCGAAAGCCAGATGAATATAACATCTTCAAGGGAGTAACAAGAAACTACCTCTTTATGGGAATAGTGGGAATAACTCTTGTGCTTCAGATTATCATCGTTGAATTTCTGGGAAAATTCACCAAGACAGTCAGGCTTAATTGGAAGATGTGGATCATTTCTGTCGTCATTGGATTCATCAGCTGGCCCCTTGCCGCGGCTGGGAAGTTGATACCTTTGCCTGAAACTCCCTTTGCCGAGTATTTTACAAGATGTTTCGGGAGATGTTTCCGGCGATGA 3804 0.4369 MRNNYPVHDWPTCLRNFLSFLVVSDFGGLEIRTRFQTERISGICAFWSKKFKTQCKTGEVRKCINCITFLTLAMNREKLFDMISFRSNCFNSHATAQLDPSSSLFHLNVSDLAFFPRINCLLAFLSSESLSLITETRLHRCIIRIVLFEESVILLEKVDDEEGGRRKEEAGSRKEEVKSLKRRVKTRRLDCFRQMSYSKGSPRHQNDIEAGNSRSGDFDEGEGSSDPFDISSTKNASIERLKRWRQAALVLNASRRFRYTLDLKKEEEKQQTLRKIRAHAQAIRAAYLFKKAAVPPVNGTPTPPPATPGDFPIGQEQLASISRDHNSDVLQQYGGVRGLAESLKTNSEKGIHGDDGDLMKRRNAYGSNNYPRKKPRSFLMFVWDACKDLTLVILMVAAVASLALGIKSEGIKEGWYDGGSIAFAVILVIVVTAISDYKQSLQFRDLNEEKRNIHLEVIRNGRRVEISIYDIVVGDVIPLNIGDQVPADGILITGHSLAIDESSMTGESKIVHKDSKNPFLMSGCKVADGSGTMLVTGVGINTEWGLLMASISEDTGEETPLQVRLNGVATFIGIVGLTVAAAVLVVLLVRYFTGHTENSDGNSQFRAGHTKLGTAINGAIKIVTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVTEAYVGGKKTDPPHNKSELADKYCSLLVEGVAQNTNGSVYVPEVGKSVEVSGSPTEKAILKWGIQLGMDFEAVRSESSIIHVFPFNSEKKRGGVAVRKPNSQVHIHWKGAAEIVLACCTAYLDANNQSVEMDEEKMTYFKNAIEDMAAESLRCVAIAYRSYETEKVPSSEEELARWSLPDDDLVLLAIVGLKDPCRYGVKDAVQLCQKAGVKVRMVTGDNVQTARAIALECGILGSSADAKEPNIIEGKRFRELSDSEREDIAERISVMGRSSPNDKLLLVQALRKKGHVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAVSSGDVPLNTVQLLWVNLIMDTLGALALATEPPTDHLMDRSPVGRKEPLITNIMWRNLLIQAIYQISVLLVLNFQGRTLLGLKHEEFTHSLRVKNTLIFNAFVFCQIFNEFNARKPDEYNIFKGVTRNYLFMGIVGITLVLQIIIVEFLGKFTKTVRLNWKMWIISVVIGFISWPLAAAGKLIPLPETPFAEYFTRCFGRCFRR 1267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g1014 1267 FunFam Calcium-transporting ATPase 431 552 - -
Lele19g1014 1267 Pfam Cation transporter/ATPase, N-terminus 334 401 IPR004014 -
Lele19g1014 1267 FunFam Calcium-transporting ATPase 878 1029 - -
Lele19g1014 1267 FunFam Calcium-transporting ATPase 236 292 - -
Lele19g1014 1267 SFLD C1.7: P-type atpase like 658 1036 - -
Lele19g1014 1267 SFLD p-type atpase 658 1036 IPR044492 -
Lele19g1014 1267 SUPERFAMILY Calcium ATPase, transduction domain A 454 549 IPR008250 -
Lele19g1014 1267 SMART Cation_ATPase_N_a_2 332 406 IPR004014 -
Lele19g1014 1267 MobiDBLite consensus disorder prediction 197 232 - -
Lele19g1014 1267 Pfam haloacid dehalogenase-like hydrolase 673 998 - -
Lele19g1014 1267 Gene3D - 686 884 IPR023299 GO:0000166
Lele19g1014 1267 FunFam Calcium-transporting ATPase 686 884 - -
Lele19g1014 1267 FunFam Calcium-transporting ATPase 9 plasma membrane-type 530 700 - -
Lele19g1014 1267 MobiDBLite consensus disorder prediction 198 212 - -
Lele19g1014 1267 Gene3D - 236 291 - -
Lele19g1014 1267 Gene3D - 359 552 - -
Lele19g1014 1267 PRINTS P-type cation-transporting ATPase superfamily signature 877 888 - -
Lele19g1014 1267 PRINTS P-type cation-transporting ATPase superfamily signature 984 1003 - -
Lele19g1014 1267 PRINTS P-type cation-transporting ATPase superfamily signature 676 690 - -
Lele19g1014 1267 PRINTS P-type cation-transporting ATPase superfamily signature 1008 1020 - -
Lele19g1014 1267 PRINTS P-type cation-transporting ATPase superfamily signature 899 909 - -
Lele19g1014 1267 PRINTS P-type cation-transporting ATPase superfamily signature 500 514 - -
Lele19g1014 1267 Pfam Ca2+-ATPase N terminal autoinhibitory domain 225 268 IPR024750 GO:0005516
Lele19g1014 1267 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 616 700 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele19g1014 1267 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 951 1064 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele19g1014 1267 PANTHER CATION TRANSPORTING ATPASE 277 1248 - -
Lele19g1014 1267 CDD P-type_ATPase_Ca_PMCA-like 360 1117 - -
Lele19g1014 1267 Gene3D - 673 1029 IPR023214 -
Lele19g1014 1267 PRINTS Sodium/potassium-transporting ATPase signature 795 813 - -
Lele19g1014 1267 PRINTS Sodium/potassium-transporting ATPase signature 669 690 - -
Lele19g1014 1267 PRINTS Sodium/potassium-transporting ATPase signature 1056 1077 - -
Lele19g1014 1267 PRINTS Sodium/potassium-transporting ATPase signature 419 439 - -
Lele19g1014 1267 Pfam Cation transporting ATPase, C-terminus 1069 1246 IPR006068 -
Lele19g1014 1267 Gene3D - 384 1237 - -
Lele19g1014 1267 ProSitePatterns E1-E2 ATPases phosphorylation site. 678 684 IPR018303 -
Lele19g1014 1267 FunFam Calcium-transporting ATPase 384 441 - -
Lele19g1014 1267 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 683 881 IPR023299 GO:0000166
Lele19g1014 1267 SUPERFAMILY HAD-like 674 1089 IPR036412 -
Lele19g1014 1267 SUPERFAMILY Calcium ATPase, transmembrane domain M 333 1247 IPR023298 -
Lele19g1014 1267 Pfam E1-E2 ATPase 454 654 - -
Lele19g1014 1267 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 326 1247 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Lele19g1014 1267 FunFam Calcium-transporting ATPase 1001 1250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g1014 Lele-ChrLele19 6477298 6495203 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g1014 201 1257 Primary Pumps ATPases AT4G29900 74.270 0.0 1594