Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g1012 ATGGGCTCCGCCAAAAAGCAGGATCTTGAAGCTGCCAAGAAAAAGAGATCTGGAACAAGGAAACTAATTTTTAACAGGGCGAAACAGTATGCAAGGGAATATGACGAGCAGGCATGTAAACAAAAGGAGTTGATTAGATTGAAGCGTGAAGCAAAGCTTAAGGGCGGATTTTATGTCGACCCAGAAGCCAAGCTGTTATTCATCATCAGGACCCGTGGGAACCAGATGATAATGAAAATTTTGAATTCCAGTATCAATGCTATGGACCCCAAAAGTAGGAAGATTTTGCAGCTTCTGCGTCTGCCACAGATATTTAATGGTGTCTTTCTCAAAGTTAACAAAGCCACTATGAATATGCTGCACAGGGTTGAGCCTTATGTTACTTATGGGTATGCAACTTTTCAATTTCATTTCCTAGTGTTCTTTAGAATCATTCCTCGTATCACGTGCTCATATTATAAACAAATTGACTTTAGGTACCCTAATTTAAAAAGTGTCAAGGAACTGATCTACAAGAGGGGTTTTGGGAAAGTTAACAAGCAGAGAATTCCCTTGACTGACAACTCCATCATTGAACAGAGTTCGGGTCAACATGGGATCATGACCGTTGGACCTCACTTCAGGGAGGCGAATAACTTCCTGTGGCCTTTCAAGCTAAAGGCAGCACTAGGTGGTTTGAAGAAAAAAAGGAATCATTATGTTGAAGGAGGTGGTGCTGGCAACCGTGAAGATTATATCAATGAGCTCATTAGAAGGATGAACTAG 765 0.4118 MGSAKKQDLEAAKKKRSGTRKLIFNRAKQYAREYDEQACKQKELIRLKREAKLKGGFYVDPEAKLLFIIRTRGNQMIMKILNSSINAMDPKSRKILQLLRLPQIFNGVFLKVNKATMNMLHRVEPYVTYGYATFQFHFLVFFRIIPRITCSYYKQIDFRYPNLKSVKELIYKRGFGKVNKQRIPLTDNSIIEQSSGQHGIMTVGPHFREANNFLWPFKLKAALGGLKKKRNHYVEGGGAGNREDYINELIRRMN 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g1012 254 FunFam 60S ribosomal protein L7 202 254 - -
Lele19g1012 254 SUPERFAMILY Ribosomal protein L30p/L7e 156 254 IPR036919 -
Lele19g1012 254 ProSitePatterns Ribosomal protein L30 signature. 95 127 IPR018038 -
Lele19g1012 254 Pfam Ribosomal L30 N-terminal domain 4 61 IPR012988 -
Lele19g1012 254 Gene3D - 65 254 IPR036919 -
Lele19g1012 254 CDD Ribosomal_L7_archeal_euk 65 254 IPR035808 -
Lele19g1012 254 FunFam 60S ribosomal protein L7 65 201 - -
Lele19g1012 254 PANTHER 60S RIBOSOMAL PROTEIN L7 4 254 IPR039699 -
Lele19g1012 254 SUPERFAMILY Ribosomal protein L30p/L7e 80 134 IPR036919 -
Lele19g1012 254 Pfam Ribosomal protein L30p/L7e 66 127 IPR016082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g1012 Lele-ChrLele19 6457740 6459306 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g1012 4 254 Cytoplasmic Ribosomal Protein Gene Family AT3G13580 65.900 3.89e-113 323