Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g1007 ATGGCTTCTGCAAGTGATGGCGGGAACTGGAAGTACTTCTTCCCCTACCTCTCCTTCGTCTTCGCCATTCTTTTCTTCACTCATTCCCATTTCGCTCCCAAACTCTTCATCGGCAATGAAACGGTGCGTGTCAAGAAGACTCCGGATCTACCCCTCCGGTTCCGTTCCGATGGTACCTTCAAAATCCTCCAGGTGGCTGATATGCATTTTGGAAGTGGCATCATAACAAGTTGCCGAGATGTGTTGGATTCTGAGTTCCAGTATTGTTCCGATCTTAACACGACGCGGTTTCTGGAGCGCTTGATTGAGGCTGAGAAACCTGATTTTATTGCCTTTACTGGTGATAATATATTTGGGTCAAGTACCACTGATGCTGCAGAGTCTATGTTTAAAACCTTTGGCCCTGCCATGGAATCAGGACTTCCTTGGGCAGCAGTTCTTGGAAACCATGACCAAGAATCAACTATGAATCGTGAAGAATTAATGTCTTTAATCTCCCTCATGGATTATTCAGTCTCGCAAGTCAATCCATGGATGGATGGTCTATCTAATCCTACCCAAGATGCAATGACAAGTAATATTGATGGCTTTGGCAATTATCACCTCAGAGTTTATGGTGCCCCAGGCTCCCCATTGGCAAATAGCAGCATTATGAATCTCTACTTTCTTGACAGTGGAGACAGGGCTGTTTATCAGGGAAAGCGAACTTATGGATGGATCAAAGAGTCTCAGCTTAATTGGCTTCGTAATGTTTCTATAGAATTTCAGGCACAAAAGCAACATCCTCTTCCCTTTTCTGATGCATTTCCACCTCCAGCGCTTGCGTTTTTCCATATCCCAATCCCAGAAATTTGGCAGCTGTTCTACAAAGAGATTGTTGGTGAATTTCAAGAAAGTGTCGCATGTTCATCGGTGAATTCAGGAGTCTTGAAGACCTTTGTTTCCATGGGAGATGTGAAGGCTGTGTTTATGGGCCATGACCACAAAAATGACTTCTGCGGAAACTTGGACGGTATCTGGTTCTGTTATGGTGGTGGCTTTGGCTACCATGCGTATGGAAAAGCCGGGTGGCCCAGGAGAGCAAGGATCATTCTGGCTGAACTTCAGAAGGGACAAAGCTCCTGGATGGGTGTAGAGAAAATCAGGACGTGGAAACGTCTGGATGATGAGAAGCTTAGCAGGATTCACGAACAAATTCTCTGGGATTCACGGCTCTATTAG 1221 0.4537 MASASDGGNWKYFFPYLSFVFAILFFTHSHFAPKLFIGNETVRVKKTPDLPLRFRSDGTFKILQVADMHFGSGIITSCRDVLDSEFQYCSDLNTTRFLERLIEAEKPDFIAFTGDNIFGSSTTDAAESMFKTFGPAMESGLPWAAVLGNHDQESTMNREELMSLISLMDYSVSQVNPWMDGLSNPTQDAMTSNIDGFGNYHLRVYGAPGSPLANSSIMNLYFLDSGDRAVYQGKRTYGWIKESQLNWLRNVSIEFQAQKQHPLPFSDAFPPPALAFFHIPIPEIWQLFYKEIVGEFQESVACSSVNSGVLKTFVSMGDVKAVFMGHDHKNDFCGNLDGIWFCYGGGFGYHAYGKAGWPRRARIILAELQKGQSSWMGVEKIRTWKRLDDEKLSRIHEQILWDSRLY 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g1007 406 CDD MPP_Dcr2 58 353 - -
Lele19g1007 406 Pfam Calcineurin-like phosphoesterase 60 329 IPR004843 GO:0016787
Lele19g1007 406 SUPERFAMILY Metallo-dependent phosphatases 59 368 IPR029052 -
Lele19g1007 406 PIRSF Ptase_At2g46880 14 401 IPR011230 -
Lele19g1007 406 FunFam Probable inactive purple acid phosphatase 29 59 379 - -
Lele19g1007 406 Gene3D - 58 382 IPR029052 -
Lele19g1007 406 PANTHER PHOSPHATASE DCR2-RELATED-RELATED 24 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g1007 Lele-ChrLele19 6391341 6393767 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele19g1007 19 6391341 6393767 Lele21g0900 21 6063082 6063898 CCT
Lele19g1007 19 6391341 6393767 Lele23g1151 23 17056993 17057805 CCT
Lele17g0534 17 17506586 17509042 Lele19g1007 19 6391341 6393767 hybridization