Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0990 ATGACCAATCCGAAGCTCTTCGTCTTCTCAATTGTCCTTGCCTCACTGTTCGTTATAATCACACCACAGAAATCACCCATCGAACCAGAGGATGCGATTTCATCTCTGAGGATTGAATTAGAGAAACTCAAGACGAAGGTTTCAATCTTAGGTGGTTTCTTTACTTACAACAAGTCCACAATTGAGAAGAGCGATAATAAATTGAAAATTCAAGATGATGGCATTAAACAGATGGAGAATATTATTCTAGAGAAATCACAAAGTATCGCAACGCTACAGAATGAAATTGAAGATTTTCAGCTTCATAAAGTTAGTAATGAACAGAAGATTGGAAACCACATGGCCGAAGAGGCTCCTCAAGTGACAGAGGAGTGGATACCGGTTATGAAGGATCAATGGTTCCCTTTCGTTTCTTCCCTCGGTTCTCATTTTCAACCTTTAACGGTGAAAATTATTGAGGCCTATCATGTGACTGAGAACTTGTTGCTATCAAATAAGGCCAAGATACAGACATCAGTTTCTCCTTTCATACAGGCCAGTTCAGGAAAATCAGTATGGGCTTGCAGGATTTTGGTCACGTCTATAATTTCATACCATAACCAGGAACGTTTAGGTGGGTGCTATGATATATGGTCAAGCGGCCTAGTTGATCCAGTTGAACAATGTCTGAAAACCAGCAAATTAGCAAGATCCCTTGCTTCTATAGAGCTTGCTTGGTTTGCTGCCACCGCTTTACTGTGCTTACCTGTTCTGAAGCTTTCAGAACAGGGCATGTTACGGATTGGATATCTTAATTGCATTTTGAATAGTAGCCGCGTTGGAGCGCGCATTTTGGATTTGAATTTTCGCTGAGGTTGCGACATTATTTCTCAGTGGCTTCCACCTGTTCCTGCAAGGGAATACACAGATGCAGAGATTGCATCACAAGTGGTGATTAGGGATATTTTGAGTGCACCATATGTTCTTCCTAAAAATCCGAAAGTTGCCTTCATGTTTCTGACTCCTGGTTCCCTTCCATTTGAGCAATTGTGGGATAAGTTTTTTCAAATGAACTATGAGCTGCTTTACTGTTAAATGATTGTGGTGTGGGGTAAGAATTCAATGGTTGATGCAGAGAGACGGCTATTGGCAAATGCTTTACAAAATCCCGACAATCAGCAATTTGTTTTACTTTCTGATAGTTGCGTGCCACTGTATAGTTTTGACTATATATACGACTATCTGATGTATACAAATATTAGCTTTGTGGATTGATTGCATGATTAG 1266 0.4013 MTNPKLFVFSIVLASLFVIITPQKSPIEPEDAISSLRIELEKLKTKVSILGGFFTYNKSTIEKSDNKLKIQDDGIKQMENIILEKSQSIATLQNEIEDFQLHKVSNEQKIGNHMAEEAPQVTEEWIPVMKDQWFPFVSSLGSHFQPLTVKIIEAYHVTENLLLSNKAKIQTSVSPFIQASSGKSVWACRILVTSIISYHNQERLGGCYDIWSSGLVDPVEQCLKTSKLARSLASIELAWFAATALLCLPVLKLSEQGMLRIGYLNCILNSSRVGARILDLNFRXGCDIISQWLPPVPAREYTDAEIASQVVIRDILSAPYVLPKNPKVAFMFLTPGSLPFEQLWDKFFQMNYELLYCXMIVVWGKNSMVDAERRLLANALQNPDNQQFVLLSDSCVPLYSFDYIYDYLMYTNISFVDXLHD 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0990 421 Coils Coil 75 95 - -
Lele19g0990 421 Pfam Core-2/I-Branching enzyme 361 419 IPR003406 GO:0016020|GO:0016757
Lele19g0990 421 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 361 421 IPR044174 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0990 Lele-ChrLele19 6256809 6266229 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g0899 21 6058067 6061906 Lele19g0990 19 6256809 6266229 CCT
Lele22g0900 22 6108012 6112098 Lele19g0990 19 6256809 6266229 CCT
Lele23g1152 23 17058979 17063012 Lele19g0990 19 6256809 6266229 CCT
Lele24g0873 24 5993335 5997321 Lele19g0990 19 6256809 6266229 CCT
Lele17g0548 17 17636307 17640305 Lele19g0990 19 6256809 6266229 hybridization