Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0981 ATGGAGGGGAAGCTTAGACGTATTTACTCTGTGGAACCCAGAAAAATAGCAGAAGCTGAGTTTGCGAGAATCTACTTGAGCCATTTAGTTCCAGCTTTGATGAAACTAAATCAGCAGCAGCAGAAGAAGAAGAGTACCAATGAAGAAGATGATCAGAAGAAGAGTTGTTTGAATGTTGTGAAGCATGAAGTGGGGATGGCTATGGTGTGGTCAGCTCCACCAGGCTTTGCATGGAGCAAAGCCCTAAAGGCCAATTTTCAAACAGATCACACCAATGTAGCAACAATAATCAATGGCGACGACGATGACCATCACAATGTTAATGATCCTTCCTCGTCACCATATTTCTCTGCAAAAAACCCTACAACCACCGGTTCTTCCAAATCTTGTGTTCATAATAATGAAGAAGAAGAAGAAGAAGGGTTTAAGAGACTGAGAAGGTTGATACCAGGTGGAGAAGAAATGGGTGATATCGATGAAGAAGAAATGGTTCGAGAATTGGAGAGTTATATAAGGTGCCTGCAAACGCAGGTGAATATTCTTCAATGTTTGGCTCACACATCTTGA 567 0.418 MEGKLRRIYSVEPRKIAEAEFARIYLSHLVPALMKLNQQQQKKKSTNEEDDQKKSCLNVVKHEVGMAMVWSAPPGFAWSKALKANFQTDHTNVATIINGDDDDHHNVNDPSSSPYFSAKNPTTTGSSKSCVHNNEEEEEEGFKRLRRLIPGGEEMGDIDEEEMVRELESYIRCLQTQVNILQCLAHTS 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0981 188 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 21 186 IPR044660 GO:0006355
Lele19g0981 188 CDD bHLH_AtIBH1_like 143 185 IPR044549 GO:0006355
Lele19g0981 188 MobiDBLite consensus disorder prediction 115 130 - -
Lele19g0981 188 MobiDBLite consensus disorder prediction 115 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0981 Lele-ChrLele19 6156886 6157452 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0981 6 188 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30180 31.694 9.85e-17 72.0