Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0976 ATGATGCCAGCTTACACCCAGATTCCAACAACAGATAAGGACAACAATAAAACTTCAATCTCAATTCCTTTAGAAAACAAAGAAATGGCATTAACAATGATACCTCCAAATTCAAAACTGGAGTTTGCAACTATGGAAAGATTCCTCAACAGCATCAACAACAAAGAGAAACCCATAAGTTTCTCACCCGAGGAACTCGAAGAAATCACGAAGAACTACACCACTATTCTGGGTTTTGGTGCTTATGGGGTGGTTTACAAAGGTGAATTGTCAAATGAAGAGAAAGTTGCAGTCAAAGTTCTCAAAACTTTGGATCTTGGCACAGAAGAACAATTCAAGGCAGAAGTTAGCACTATTGGAAGAACTTACCATATCAATCTAGTTAGATTTCGGTCTGGCGAAACTTTGCAGCAGAGAAAGAAGCAACGTGAAGATGACACACTTCAGAGGAACAAGAGGAAGAAGAAGAAGAGAGGGAAAAAGGCTGAGGGAATGATAATGGTGGCTCTTTGTTGTGTTCAATATTCGCCTTATGATAGACCTGTAATGAGTAATGTGGTGAAGATGTTGGAGGGTGATAGAGAAATTCCTCCACTTCCATTTCCATTTCAGAATTTGGTGTGTACTAAACCAAATTTTACACCAGAGGGAGCCCATAATGAAGATTCAGATGCTTCTTCTTCATGGGTTGATAGAATGTTTTGA 705 0.3915 MMPAYTQIPTTDKDNNKTSISIPLENKEMALTMIPPNSKLEFATMERFLNSINNKEKPISFSPEELEEITKNYTTILGFGAYGVVYKGELSNEEKVAVKVLKTLDLGTEEQFKAEVSTIGRTYHINLVRFRSGETLQQRKKQREDDTLQRNKRKKKKRGKKAEGMIMVALCCVQYSPYDRPVMSNVVKMLEGDREIPPLPFPFQNLVCTKPNFTPEGAHNEDSDASSSWVDRMF 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0976 234 SUPERFAMILY Protein kinase-like (PK-like) 54 132 IPR011009 -
Lele19g0976 234 Pfam Protein tyrosine and serine/threonine kinase 75 132 IPR001245 GO:0004672|GO:0006468
Lele19g0976 234 PANTHER OS07G0415500 PROTEIN 53 130 - -
Lele19g0976 234 MobiDBLite consensus disorder prediction 214 234 - -
Lele19g0976 234 MobiDBLite consensus disorder prediction 136 160 - -
Lele19g0976 234 ProSitePatterns Protein kinases ATP-binding region signature. 77 99 IPR017441 GO:0005524
Lele19g0976 234 Gene3D Phosphorylase Kinase; domain 1 44 141 - -
Lele19g0976 234 MobiDBLite consensus disorder prediction 136 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0976 Lele-ChrLele19 6086132 6087296 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0976 61 128 Receptor kinase-like Gene Family AT5G39030 48.529 5.53e-13 65.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Lele19g0976 PK_Tyr_Ser-Thr 8e-06 CL0016