Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0975 ATGGTGTGTGAGGTGGGTGATGATGATGATGAGGTTGCTACAGAAGAAGGCAGATTATGGCATACTCTTTGCCTTCTCAATGCATATGGCAACTTCAAGCAACAGAAGCGGAAAGTTAATTTTCTTCTGCTTCCTGTTGCCATGCCTGTGATGGCTTTTTTTTTGACAACAAATATGAGTTTTGTGTTTTCTCCACCGTCGTTTCATAGTTCATACGATGATTTTCAGACACAAGCTCAAAATACGTTCGATAAATTCGATGACAGTGTTAATTCTACCATGAAATGGGCAGTGGCTGAGTCTATTGTTTATGGGGTGGTGGTGATAATAGCCGTTATAGCAATAGTATACGCCATTGTTGAGTGCTTGAAGAAAGCAGGATCAGTGATTCCAGCTTACACCCAGATTCCAACCACAGATAAAGCTTCAAGTTCGCATCCTTCAAACAACAAAGAAATTGAATTACCAATTGCACCAGATTCACAAGTTCTGGAGTTTGCAACTATGGAAAGATTCCTCAACAACATCAACCAAGAGAAACCCATCAGATTCTCACCTGAGGAACTTGAACAAATCACAAACAACTACACCACTGTTTTGGGGTCTGGTGCTTTTGGGGTGGTTTATGAAGGTGAATTGTCAAATGGAAAGCAAGTTGCAGTGAAAGTTCTTAACAGTTTGGATCTGGGCACAGAAGAACAATTCAAAGCAGAAGTTAGCACCATTGGAAGAACTTACCATATCAATTTAGTTATGCTTTATGGTTTCTGCTTCCACCGTGACAAGAGAGCTCTTGTATATGAGTTTGTGCAAAATGGGTCTCTCAACAATTTATTATTTGGCAGTCTGAACAGAGAAGTTGAGTTTGGTAAGCTTCATGAGATTGCGATCGGAACAGCGAAAGGACTTGCTTACTTACATGAAGAGTGTCAACATAGAATCATTCATTATGATATTAAGCCAGAGAACATACTTGTTGGCTTGAACTTGGAACCAAAAGTTGCAGATTTTGGTCTTGCAAAACTTTGCAGCAGAGAAAGCAGCCAAGTGAATATGACACACTTCAGAGGAACAAGAGGGTATGCTGCACCAGAATTATGGAAGCTTTATCCTGTGAATCATAAGTGTGATGTTTATAGTTTTGGGATTGTTCTGTTTGAAATTGTGGGGAGGAGAAGGCATTTTGTTAGTGGTTGCAATGAATCACAACAATGGCTTCCAAAATGGACATGGGATATGTTTGAGAACAATGAATTACCAGTGATGATTTCACTGTGTGGAATTGAAGAGAAAGAGAGGGAAAAGGCTGACAGAATGTTAATGGTGGCTCTTTGGTGTGTTCAATATTCCCCTTCTGATAGACCTCTTATGAGTAATGTGGTGAAGATGTTGGAGGGTGATAGAGAAATCCCTCCACCACCATTTCCATTTCAGAATTTGGTGTCTTCTAAATCACCTTTGACTTTGAAGGGAATCAAGGAAGATTCAGATGATTCTACTTCATGGGGCACTGAATCTTCGGAACAATCTAATTCTAAACCAGCCAACAATATATTCCATATAGAAAAATCTCCATAG 1578 0.3967 MVCEVGDDDDEVATEEGRLWHTLCLLNAYGNFKQQKRKVNFLLLPVAMPVMAFFLTTNMSFVFSPPSFHSSYDDFQTQAQNTFDKFDDSVNSTMKWAVAESIVYGVVVIIAVIAIVYAIVECLKKAGSVIPAYTQIPTTDKASSSHPSNNKEIELPIAPDSQVLEFATMERFLNNINQEKPIRFSPEELEQITNNYTTVLGSGAFGVVYEGELSNGKQVAVKVLNSLDLGTEEQFKAEVSTIGRTYHINLVMLYGFCFHRDKRALVYEFVQNGSLNNLLFGSLNREVEFGKLHEIAIGTAKGLAYLHEECQHRIIHYDIKPENILVGLNLEPKVADFGLAKLCSRESSQVNMTHFRGTRGYAAPELWKLYPVNHKCDVYSFGIVLFEIVGRRRHFVSGCNESQQWLPKWTWDMFENNELPVMISLCGIEEKEREKADRMLMVALWCVQYSPSDRPLMSNVVKMLEGDREIPPPPFPFQNLVSSKSPLTLKGIKEDSDDSTSWGTESSEQSNSKPANNIFHIEKSP 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0975 525 ProSitePatterns Protein kinases ATP-binding region signature. 200 222 IPR017441 GO:0005524
Lele19g0975 525 SMART serkin_6 194 464 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele19g0975 525 FunFam Putative receptor-like protein kinase 270 471 - -
Lele19g0975 525 Pfam Protein kinase domain 198 462 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele19g0975 525 FunFam S-receptor-like serine/threonine-protein kinase 165 269 - -
Lele19g0975 525 SUPERFAMILY Protein kinase-like (PK-like) 176 465 IPR011009 -
Lele19g0975 525 ProSiteProfiles Protein kinase domain profile. 194 475 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele19g0975 525 ProSitePatterns Serine/Threonine protein kinases active-site signature. 314 326 IPR008271 GO:0004672|GO:0006468
Lele19g0975 525 Gene3D Transferase(Phosphotransferase) domain 1 270 470 - -
Lele19g0975 525 MobiDBLite consensus disorder prediction 475 525 - -
Lele19g0975 525 Gene3D Phosphorylase Kinase; domain 1 167 269 - -
Lele19g0975 525 MobiDBLite consensus disorder prediction 502 519 - -
Lele19g0975 525 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 92 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0975 Lele-ChrLele19 6079986 6083275 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0975 183 502 Receptor kinase-like Gene Family AT5G38280 42.249 5.14e-86 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Lele19g0975 Pkinase 3.6e-44 CL0016