Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0974 ATGAAGTATATCAGGACCGGCAGCGTCAAGAGGCTCTTCTCCTTGAAACGACGTAGTTTCACTGAGGAAGTTCCCACCATCGATGAAAAAGTTCAGAACTTGCAGGTTCTTCCTGCCGCAGAAGAACAGCCTTCTTCTCAAAGACCCACTTGGAAATGCTTCTCCTACGAAGAAATCTTCGATGCCACCAATGGCCTCAGCTCAGAGAATTTGGTCGGAAAAGGAGGCTACGCGCTGGTTTACAAGGGGACATTAGAAGATGGGTACGAGATTGCTGTTAAGAGGCTGACAAGAACTTGTTCGAGCGATGAGAGGAAAGAGAAGGAGTTCTTAACAGAGATTGGCACAATCGGTCATGTTAATCATCCAAATGTTTTGCCTCTTCTTGGTTGTTGTATTGACAAAGGGCTTTACCTCGTCTTCGAGCTTTCGTCCAAAGGTTCTGTTGCCTCTCTTCTGCATGATCAAAACTTGCCTCCCATGGACTGGAAAACCAGGCATAAGATAGTTCTTGGAACAGCTCGTGGCCTCCATTACTTGCACAAAGGCTGCAAAAGAAGGATAATCCATAGAGACATCAAAGCCTCAAACATTCTATTAACTTCAGATTTTGAATCACAGATATCTGATTTCGGGCTAGCAAAATGGCTTCCGAATCAATGGACTCATCATTCAATAGCACCAATAGAAGGGACATTTGGGCATTTGGCACCAGAGTACTATTTACACGGAATAGTGGATGAGAAAACAGACGTGTTTGCTTTTGGGGTTTTCTTGCTTGAAGTCATCTCAGGGAGGAAGCCGGTGGACGGTTCTCACCAAAGCTTACACAACTGGGCAAAACCATTATTGAACAAAGGGGAAACAGAAAAGCTGGTGGATCCAAAGCTAGAAGGGGCCTATGATTTAGCTCAGTCACAAATACTTGCTTTTGCAGCTTCTCTCTGTATTCGAGCTTCTGCAACTTGGCGACCTACCATGAGCCAGGTGTTGGAGGTAATGGAGGAGGGAGAAATAGACAAGGAGAAGTGGAAGATGCCAGAGGAGGAAGAAGAGCAAGAAGAAGAGTTCTGGGGATTTGAGGATCTTGAATATGAATATGAAAGTTCATTCTCTCTCTCTCTACCAGACTCCATTGGGAGCTCTTAA 1149 0.4491 MKYIRTGSVKRLFSLKRRSFTEEVPTIDEKVQNLQVLPAAEEQPSSQRPTWKCFSYEEIFDATNGLSSENLVGKGGYALVYKGTLEDGYEIAVKRLTRTCSSDERKEKEFLTEIGTIGHVNHPNVLPLLGCCIDKGLYLVFELSSKGSVASLLHDQNLPPMDWKTRHKIVLGTARGLHYLHKGCKRRIIHRDIKASNILLTSDFESQISDFGLAKWLPNQWTHHSIAPIEGTFGHLAPEYYLHGIVDEKTDVFAFGVFLLEVISGRKPVDGSHQSLHNWAKPLLNKGETEKLVDPKLEGAYDLAQSQILAFAASLCIRASATWRPTMSQVLEVMEEGEIDKEKWKMPEEEEEQEEEFWGFEDLEYEYESSFSLSLPDSIGSS 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0974 382 SMART serkin_6 66 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele19g0974 382 Gene3D Transferase(Phosphotransferase) domain 1 145 360 - -
Lele19g0974 382 FunFam Putative receptor-like serine/threonine-protein kinase 145 359 - -
Lele19g0974 382 Gene3D Phosphorylase Kinase; domain 1 37 143 - -
Lele19g0974 382 PANTHER OS08G0249100 PROTEIN 34 363 - -
Lele19g0974 382 ProSiteProfiles Protein kinase domain profile. 66 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele19g0974 382 Pfam Protein tyrosine and serine/threonine kinase 69 332 IPR001245 GO:0004672|GO:0006468
Lele19g0974 382 ProSitePatterns Protein kinases ATP-binding region signature. 72 94 IPR017441 GO:0005524
Lele19g0974 382 FunFam Putative receptor-like serine/threonine-protein kinase 33 143 - -
Lele19g0974 382 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
Lele19g0974 382 SUPERFAMILY Protein kinase-like (PK-like) 45 334 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0974 Lele-ChrLele19 6066229 6070373 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0974 45 335 Trihelix Transcription Factor Family AT5G38560 43.522 8.49e-71 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lele19g0974 PK_Tyr_Ser-Thr 5.4e-41 CL0016