Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0961 ATGGTAAGGATGACGAGAGAGAAGGCGGAAGGGGAAGCGGAACATGGCTATGGAAGAAGAGAAAAGGAACAGAAGAACTCGGAAATGGACAAAGGGGAAGATTTATTGGTGGGAAAAGAAAGTAGAATTGTAGCAGAGGCGAATCAAATTGATCGTCGACAGTTTGTAATGGATAGTTCTACTGCAATTCGGCCTTCTACACCCAGTTGTGGTTCATCACCGGCTTCGGCACATGGTTGCAATGATGATAGCCAGCGGGTTAAATTCTTGTGTAGCTTTCTAGGAAATATAATGCCCCGTCCCCTAGATGGGAAGCTTCGCTATGTTGGTGGAGAGACACGAATTGTGAGTGTTCCCCGAGATATTGGTTATGAGGAGTTGATGAGTAAAATGAGGGAGCTGTATGATGGGGTAGCAGTCTTAAAGTACCAGCAACCTGATGAGGATCTTGATGCCCTTGTCTCTGTTGTGAATGATGATGATGTGATTAATATGATGGAAGAGTATGACAAATTGGGTTCAAGTGATGGATTCACTAGGCTCAGAATTTTTTTGTTCTCACAATCTGAACAAGATGTTTCTTCACATTTCATTGATGGGGATGAGAGGGATACTGAGAGAAGATATGTTGATGCATTGAATAATTTAAACGATGCTTCAGATTTTAGGAAGCAGCATCAAGGTGAGTTTCCTATTCTTGGTTCGGTTGAGGATCTACATGTAGCTGATCAATTCTTTAATCCAATCAATGTGGATGGTGGCCTTCATAGCCAGAGAAGTGGTGAGGTGCCCATGGCACATTTTAACTTGCATCATCCCACACTACCTCACATTGGATCCGGGCAACACCAGCAACCTATGTCCCAGAGGTACGGTGACATAGATGCACCATGGAGTCCTGCATATTACTCTCCTAGGCATCATGGTCACCATGACTCTAGATCAGTGGTAGAATTTCCATCTTCTCCTTCTTCTGCAAGATATCAGATGCCACTTCCAGAGCTACCAGATAAATGCCTTGATAGAATGCCAGAAGAATATGCACGGCATCAGGTAAATCACCATCCTGTGTATGACAATCAACCACAATATTCTGATAATGTTGTGTGGTATCCGACTGGACCTGCACCTAGTGAGAAGTCAGGTTTTCCTGGCAATATTGTTCATGGCCCTCATGTTATTGATGGGAATAGTATTTGTGAGCACTGCCGGATAAATTTTCAGAGAAGCCAATCTCATTTTGAGCATCCAAATATTAGTAATGGACTTCCACCGGTTGCTAATCCATGTGCAGAATGCCACTCAAAGAGGGATACTCTTATAATGAATGCAGATGCAAAGTTGCATCCTGTTATGTATCCTAATGAGCCAAATAATGACCACAGGTCTGCTTATAATGATGCTCAAAATCATGAGAGAGGATGGGCATTGCCGCATCAAACAAATAATCGGGTTGAAGAAACAAGGAACCATGTTTCTGGAACAGGAAGATTGAATGATCATTATGTTCTGGATGGTTCTGGCATAAATTTCTCTCTTGGGCACGGAAGTGTGGCTGATGGACATCATTTGCCTTCAAATTACGTTCACCAAAGAGCTGGGCCCGAATTGGGGCCAGAACTGTTTCATGATCAAGCTGGGGCTACTACAGCCCATCCACAAATTCCTCCTTTGGAAGAGCGCGGTGTGCGGTATGGGAACCCACCTCCTTATGGAGTTGATAGTCATTACCCTGTGACTCATGGACATGGACCTGGGCTTGCTTTCTGGAGAAATACTCCGGCTCCACTTCACATTGGACCATCTTATGAGGCATCCAGTAGTCCACCTCAGCAATTAAATGGTGTGTTAAATGCAGGAATAAGGGGAGAGGGTAGCCCAAGAATTTACATTGGACCAGATAGTCAAAGTCCTTGGGTTGATTCCTCACAAAAAATGCCAGGTCATGATGGATTACCCATCCCAGAATTCCCTTATAATCATGCTGTGAAGTTCAATCCAAGGACCCTTGGTCAAGAAAATCAACACCCAGTTGTTGTGGACACCATTCATTCCCCACAGGACATGAATGTTGGCATTCGATTGGAAACAGTTCAGCTACCAAAATCACCTTTTAATATGGCTCACAATAATGAGATTTCAAACAATGGAACTCATATATCTGAAGCGATGGGGTTGCTGAGTTTGCATGGTGAAGATAAAGGGGCAGAAAGTGCAGACAAGGTTGAGAACTCTAATGCTCAGAGTATATCTTTTTCAGAACAAAACAAAATCACTGAGAATAATAGTGAAGCTGCTGCTTCTGTTGAGTTTATAAATGCAAAATCAAAACCTGTTGAAGAATGTGATGTTGCGAAACTAGTAGATGGGGATCTAACTGCTCCTGAAGATTCCAAGCATCTAGCTAATCAATTCAGTTTCTTGCCTGAGTTGATTGCTTCTGTAAAAAAAGCTGCATTGGAAGGAGCTGAAGAGGTGAAAGCTAGAGCTAAGGAACACACCACTTCTCAGAGTCACAATTCAGCAATCCAAGATGACACAGCAAATGAAGGAGAGACAGGGAATGCTCATGGTGATTTAGAATTGGACTCTGATAACGACAATGTGGATACTTCTAAAATTGAACCTACAAAAGCTGAGGCAGAAGCTATTGCTAGAGGATTGCAGACAATTAAAAATGATGATTTGGAAGAGATCCGTGAACTAGGTTCAGGAACTTATGGGGCAGTCTATCATGGGAAATGGAAGGGTTCTGATGTGGCAATTAAGAGGATTAAAGCTAGCTGTTTTGCTGGAAGGCCCTCGGAAAGAGAAAGATTGATTGCAGATTTCTGGAAAGAGGCATTGATTCTAAGTTCACTTCATCACCCAAATGTTGTGTCCTTCTATGGGATTGTCCGTGACGGCCCTGATGGTTCTTTGGCAACTGTGACTGAGTTCATGATTAATGGATCCCTGAAACAGTTCTTGCATAAGAAAGATAGAACTATAGATCGTCGTAAGAGGCTCATTATAGCTATGGATGCGGCATTTGGGATGGAGTATTTGCATGGAAAGAACATTGTGCATTTTGATTTGAAATGTGAGAATCTATTAGTCAATATGAGAGATCCACAGCGACCTGTCTGCAAGATTGGTGATTTGGGTCTATCAAAGGTAAAGCAGAACACTCTAGTATCAGGAGGGGTGCGGGGAACTTTGCCATGGATGGCACCTGAACTCCTAAGTGGGAAAAGCAATATGGTGTCAGAGAAGATTGATGTTTATTCATTCGGGATTGTTATGTGGGAATTGCTCACTGGGGATGAACCCTATGCTGATATGCATTGTGCTTCAATAATAGGGGGTATTGTGAACAACACATTACGTCCCCAAATCCCGACATGGTGTGATCCTGAGTGGAAGTCTCTAATGGAAAGTTGCTGGGCTTCTGATCCAACAGAGAGGCCATCCTTCTCAGAAATCTCAAAGAAGCTAAGGACTATGGCTGCACAAATGAATGTGAAGTAG 3510 0.4293 MVRMTREKAEGEAEHGYGRREKEQKNSEMDKGEDLLVGKESRIVAEANQIDRRQFVMDSSTAIRPSTPSCGSSPASAHGCNDDSQRVKFLCSFLGNIMPRPLDGKLRYVGGETRIVSVPRDIGYEELMSKMRELYDGVAVLKYQQPDEDLDALVSVVNDDDVINMMEEYDKLGSSDGFTRLRIFLFSQSEQDVSSHFIDGDERDTERRYVDALNNLNDASDFRKQHQGEFPILGSVEDLHVADQFFNPINVDGGLHSQRSGEVPMAHFNLHHPTLPHIGSGQHQQPMSQRYGDIDAPWSPAYYSPRHHGHHDSRSVVEFPSSPSSARYQMPLPELPDKCLDRMPEEYARHQVNHHPVYDNQPQYSDNVVWYPTGPAPSEKSGFPGNIVHGPHVIDGNSICEHCRINFQRSQSHFEHPNISNGLPPVANPCAECHSKRDTLIMNADAKLHPVMYPNEPNNDHRSAYNDAQNHERGWALPHQTNNRVEETRNHVSGTGRLNDHYVLDGSGINFSLGHGSVADGHHLPSNYVHQRAGPELGPELFHDQAGATTAHPQIPPLEERGVRYGNPPPYGVDSHYPVTHGHGPGLAFWRNTPAPLHIGPSYEASSSPPQQLNGVLNAGIRGEGSPRIYIGPDSQSPWVDSSQKMPGHDGLPIPEFPYNHAVKFNPRTLGQENQHPVVVDTIHSPQDMNVGIRLETVQLPKSPFNMAHNNEISNNGTHISEAMGLLSLHGEDKGAESADKVENSNAQSISFSEQNKITENNSEAAASVEFINAKSKPVEECDVAKLVDGDLTAPEDSKHLANQFSFLPELIASVKKAALEGAEEVKARAKEHTTSQSHNSAIQDDTANEGETGNAHGDLELDSDNDNVDTSKIEPTKAEAEAIARGLQTIKNDDLEEIRELGSGTYGAVYHGKWKGSDVAIKRIKASCFAGRPSERERLIADFWKEALILSSLHHPNVVSFYGIVRDGPDGSLATVTEFMINGSLKQFLHKKDRTIDRRKRLIIAMDAAFGMEYLHGKNIVHFDLKCENLLVNMRDPQRPVCKIGDLGLSKVKQNTLVSGGVRGTLPWMAPELLSGKSNMVSEKIDVYSFGIVMWELLTGDEPYADMHCASIIGGIVNNTLRPQIPTWCDPEWKSLMESCWASDPTERPSFSEISKKLRTMAAQMNVK 1169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0961 1169 Pfam PB1 domain 102 187 IPR000270 GO:0005515
Lele19g0961 1169 SMART serkin_6 896 1163 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele19g0961 1169 MobiDBLite consensus disorder prediction 856 878 - -
Lele19g0961 1169 CDD PB1_UP2 90 186 - -
Lele19g0961 1169 ProSitePatterns Protein kinases ATP-binding region signature. 902 923 IPR017441 GO:0005524
Lele19g0961 1169 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 106 188 - -
Lele19g0961 1169 SUPERFAMILY CAD & PB1 domains 103 195 - -
Lele19g0961 1169 Pfam Protein tyrosine and serine/threonine kinase 897 1159 IPR001245 GO:0004672|GO:0006468
Lele19g0961 1169 MobiDBLite consensus disorder prediction 826 878 - -
Lele19g0961 1169 SUPERFAMILY Protein kinase-like (PK-like) 888 1157 IPR011009 -
Lele19g0961 1169 Gene3D - 105 189 - -
Lele19g0961 1169 Gene3D Phosphorylase Kinase; domain 1 881 981 - -
Lele19g0961 1169 Gene3D Transferase(Phosphotransferase) domain 1 982 1169 - -
Lele19g0961 1169 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1021 1033 IPR008271 GO:0004672|GO:0006468
Lele19g0961 1169 CDD STKc_MAP3K-like 902 1159 - -
Lele19g0961 1169 MobiDBLite consensus disorder prediction 1 34 - -
Lele19g0961 1169 MobiDBLite consensus disorder prediction 306 328 - -
Lele19g0961 1169 PANTHER SERINE-THREONINE PROTEIN KINASE 131 1161 - -
Lele19g0961 1169 PRINTS Tyrosine kinase catalytic domain signature 1086 1108 IPR001245 GO:0004672|GO:0006468
Lele19g0961 1169 PRINTS Tyrosine kinase catalytic domain signature 1130 1152 IPR001245 GO:0004672|GO:0006468
Lele19g0961 1169 PRINTS Tyrosine kinase catalytic domain signature 1015 1033 IPR001245 GO:0004672|GO:0006468
Lele19g0961 1169 PRINTS Tyrosine kinase catalytic domain signature 978 991 IPR001245 GO:0004672|GO:0006468
Lele19g0961 1169 MobiDBLite consensus disorder prediction 835 851 - -
Lele19g0961 1169 SMART PB1_new 101 186 IPR000270 GO:0005515
Lele19g0961 1169 ProSiteProfiles Protein kinase domain profile. 896 1162 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele19g0961 1169 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 984 1169 - -
Lele19g0961 1169 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 889 983 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0961 Lele-ChrLele19 5964896 5971218 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0961 81 1169 MAP Kinase Kinase Kinase AT5G57610 55.426 0.0 1106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Lele19g0961 PK_Tyr_Ser-Thr 2.6e-62 CL0016