Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0946 ATGGCGGCAGCTGCTTACAGAGAGGAGCCCATGGCCGACACAGCGAAATCCCCTGTGTCGTCGGCGCAGTCACTTCACTCGCCGTGGCATTCTCCGGTGCCGTACTTGTTCGGCGGCTTGGCGGCCATGTTGGGTCTCATTGCCTTTGCCCTCTTAGTCCTCGCCTGCTCTTACTGGAAACTCTCCGGCTACCTCGAAGGCGACGGAGACGGCGAGCGAGACCTTGAAGCTGGCGACGGCAAACTCGACGACCAAGCCCAGAAAGCTCCGATTCCTTATGAGGAGAAATTCCTGGTGATTATGGCCGGACAGGAGAAGCCGACATTCTTAGCAACTCCGGTGTGGTCGAGCCGCTCAGATTCTTTCGGAGACAACAACACTAATTGTTGTTCCTGCGACAAGAACGCTAAATCTGAACTCGAAATGGCAGAGACGACCGTGAAACCAGAGGGAATCAGCGGCAACGATCAGGTACAGAGCAACAACAGGGGAATCCCAGAAACCTCACATGATCAAAACCATTGA 525 0.5505 MAAAAYREEPMADTAKSPVSSAQSLHSPWHSPVPYLFGGLAAMLGLIAFALLVLACSYWKLSGYLEGDGDGERDLEAGDGKLDDQAQKAPIPYEEKFLVIMAGQEKPTFLATPVWSSRSDSFGDNNTNCCSCDKNAKSELEMAETTVKPEGISGNDQVQSNNRGIPETSHDQNH 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0946 174 MobiDBLite consensus disorder prediction 144 174 - -
Lele19g0946 174 PANTHER PROTEIN GLUTAMINE DUMPER 4-RELATED 14 145 IPR040359 GO:0080143
Lele19g0946 174 MobiDBLite consensus disorder prediction 150 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0946 Lele-ChrLele19 5868224 5868748 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0946 26 113 Glutamine Dumper (GDU) Family AT5G57685 74.444 1.71e-41 134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g0599 17 18057782 18058306 Lele19g0946 19 5868224 5868748 hybridization
Lele18g0911 18 5868726 5869250 Lele19g0946 19 5868224 5868748 hybridization