Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0945 ATGGCAAGACCAAATTACCATCGTTATGGCTACCTTATAACGATTTCTTGTGTTGTGTTGTTGATAGCTGAGATTGGAGCAGGCAATGATGAAGCTGGTTTATTCCTAGGAGGGAAGAAGTTAATACTTGGACTTCCTAAGAAAACAGGCTTCACTCAGTTTGTGGATTTACAGCTGAATTCAAGTAATAAGAATGAGGTCGTTAAGGCTACGGGCTATTCCATGGACGTCTTCGAAGCTGCAATAGCTTACCTTAAGCGTTCACATTACAATATTTCTTTCGAGTTTAGAGCTTTCGTAGACGAACATGGAAACAGTGCTGGGAATTACGATGCACTCGTCTATCAGATTTTTGAAGGGAAGTTTGATGCTGTGGTGGGAGATGTGTCGATTTTGGCATATAGATCAAACTATGTTGACTTTACATTACCATATGCACCGTCTGATGTGAAGATGCTTGTGAAGGTCCGCCATGATCCACGGTTGAATATGTGGATTTTTGTGCGACCTTTTAGTTGGGATCTATGGTTGTCTATTGTCATCTCCAGTATTTTTATTGGAGCTATCATATTGTTAATGGAACGTAATGTCAAGGAAGATTCAGCATTGAAAAATTCACCATATAGGAAACAACTCAGCGGGGTTTCTATCTTCTGGCTTCCAGTAGAACAAGCAGTTCTTCCTGAAAGAGAAGTAGTGGTGAAGAATTGTTCTAAGTTTGTGCTCGTGATGTGGTTGATACTCGCATTTGTGCTAATGCAAAGTTACACAGCAAGCTTGTCATCAATATTGACAGTACATCAGCTACAACCTCGTTACCTTAGTGAGTATGACGTTATAAATGACCCCAACATTAATGTTGGCTACCACCATGGCTCATTCCTCGAAGGTTTATTGGTCGATGACTTGAAGATTGATAGGTCTAGGGTGAAGAACTACCCTGACATTAAAGAATATAAGGAGGCTTTGGACAAAGGAAGCCAAAAGGGTGGTGTCGACGCTATTTTTGATCATATTTCCCATATTAAGGTCTTCCTTAAGCAATATGGTTCCAATTATGCCATGGTCGAAACTAGACATCGCATTGCTGGATTTGCTTTTGCATTCCCAAAGGGCTCCAACTTAACCTCGTACTTTTCAAGAGCCATATTAAAGCTTTAA 1161 0.4031 MARPNYHRYGYLITISCVVLLIAEIGAGNDEAGLFLGGKKLILGLPKKTGFTQFVDLQLNSSNKNEVVKATGYSMDVFEAAIAYLKRSHYNISFEFRAFVDEHGNSAGNYDALVYQIFEGKFDAVVGDVSILAYRSNYVDFTLPYAPSDVKMLVKVRHDPRLNMWIFVRPFSWDLWLSIVISSIFIGAIILLMERNVKEDSALKNSPYRKQLSGVSIFWLPVEQAVLPEREVVVKNCSKFVLVMWLILAFVLMQSYTASLSSILTVHQLQPRYLSEYDVINDPNINVGYHHGSFLEGLLVDDLKIDRSRVKNYPDIKEYKEALDKGSQKGGVDAIFDHISHIKVFLKQYGSNYAMVETRHRIAGFAFAFPKGSNLTSYFSRAILKL 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0945 386 Gene3D - 35 164 - -
Lele19g0945 386 SUPERFAMILY Periplasmic binding protein-like II 13 386 - -
Lele19g0945 386 Pfam Bacterial extracellular solute-binding proteins, family 3 68 385 IPR001638 -
Lele19g0945 386 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 38 386 - -
Lele19g0945 386 SMART GluR_14 40 386 IPR001320 GO:0015276|GO:0016020
Lele19g0945 386 Gene3D - 165 293 - -
Lele19g0945 386 Pfam Ligand-gated ion channel 172 272 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0945 Lele-ChrLele19 5812009 5814995 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0945 38 386 Ion Channels AT2G29120 40.171 2.47e-69 233