Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0938 ATGAGTGTCAGGAAGTATGATGAGGCTTGTAAAGCTGGCAAACTTGACCAGATATGTGTGTGGGGAGTTGGATTGGATGCGACGCAGCTCATGTGTGTTGCTTTCTCAAATTATCATTCAATTATAATTTTTGTTTGTTTGGGGGTGAATGGATTCGTGACACAAGGCAAGCTTTATCCCGTAAGCCCAAGAGAAGCGAGCTTCGAGATAAAAATGGTGATAATGGTCGGAGAAGCTTCTCTTTCTCCCCTCTGTTGCAGTCGTCTCCACTTCAAAACCTCTTCTAGATTCAGAAGTTGCTTAACCCGAGCTAGCATCTCTATCCAGAGAAGACCCAACAACGCCAACTCGTGGAATCCTGGGCACCTCTCAACCAGCAATGACGCAGCAAATTTTGACCCCTTGGGTATTAACTCGGATTTATCTTCTGCTCTAAACTTTTCTTGGGAAAATTTGGTATGCCTGTTTTCACAAACATTTCAGAGTGCTTCAAGTACTGAGAAGGGAAAACCTAACCCTTCTCGAGGTGTAGCAGCTGCAATAGAGGATAGTTCAATTGACTTTGGGGACTTCTTCAAAGGTCCATTACCAGGAAAGTTTCTCAAGCTTTTAGGACTTCTTGCTTTGTCAAGGCTTGGTGTATACATACCACTGGGTGGGGTTAATAGGGATGCTTTTGTCGGCAATTTGGACCAGAACAGTTTATTAAGCACTCTAGACTCTTTTTCTGGAGGAGGTATTGGAAGACTTGGGATATGCTCCCTTGGTATTGTTCCCTTCATTAACGCCCAGATTGTGTTTCAACTTCTTGCACAAGTATATCCCAAGCTGCAAGATCTTCAAAAAAGAGAAGGTGAATCAGGAAGAAAGAAAGTTCTTCAGTACACAAGATATGCCTCAGTTGGATTCGCCATTGTTCAGGCAATTGGTCAAGTACTCTACCTACGTCCTTATGTAAATGACTTCAGTGCACAATGGGCTCTGTCTTCTATTATCTTATTGACTCTTGGATCTGTATTTACAACTTATATTGGTGAGAGAATTTCAGACCTAAAACTTGGGAATGGCACATCGCTTTTGATATTCACAAACATCATCTCCTACTTGCCGGCCTCGTTTGGAAGGACATTTGTACAAGGATTTAATGATGCTAACTACGTTGGACTCATCACCTTGATTGTGTCCTTCTTTTTTTTGGTTCTTGGTATCGTCTATGTTCAGGAAGCGGAGAGAAAGATTCCCCTTAACTATGCTTCAAGATACACAAGCAGAAGCAGAGGACTTGATAAATCTGCTTACCTACCCTTTAAGGTAAATAGTTCTGGAGTGATGCCCATCATATTTTCTACGTCATCATTAGCCCTGCCTGGTACTTTGGCGCGTTTCACCGGCATAAATGCTCTGAAGAAAGCTGCACTGGCTTTGAATCCTGGGGGTTCCTTCTATCTGCCAATGAACATCCTTTTAATAGCATTCTTCAACTATTATTACACTTTCCTACAATTGGACCCTGATGATTTGAGTGAACAATTGAAACGTCAAGGTGCATCAATTCCACTTGTCCGACCAGGAAAAACTACAGCCATCTTTATTAAAACAGTTCTTAGTCGAATATCGGTTCTGGGTTCGACATTTCTGGCGATTTTAGCTGCCGGACCAGCTGTTGTTGAGCAGGTTACGCACCTGACTGCATTTAGGGGATTTGCTGGAACATCTATTCTTATTCTTGTTGGTTGTGCCACAGATACAGCAAGAAAAGTTCAGGCTGAGATTATATCCCAGAAGTACAAGAACATAGAATTCTATGACTTCAACAAATATTGA 1824 0.42 MSVRKYDEACKAGKLDQICVWGVGLDATQLMCVAFSNYHSIIIFVCLGVNGFVTQGKLYPVSPREASFEIKMVIMVGEASLSPLCCSRLHFKTSSRFRSCLTRASISIQRRPNNANSWNPGHLSTSNDAANFDPLGINSDLSSALNFSWENLVCLFSQTFQSASSTEKGKPNPSRGVAAAIEDSSIDFGDFFKGPLPGKFLKLLGLLALSRLGVYIPLGGVNRDAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQVYPKLQDLQKREGESGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSAQWALSSIILLTLGSVFTTYIGERISDLKLGNGTSLLIFTNIISYLPASFGRTFVQGFNDANYVGLITLIVSFFFLVLGIVYVQEAERKIPLNYASRYTSRSRGLDKSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGINALKKAALALNPGGSFYLPMNILLIAFFNYYYTFLQLDPDDLSEQLKRQGASIPLVRPGKTTAIFIKTVLSRISVLGSTFLAILAAGPAVVEQVTHLTAFRGFAGTSILILVGCATDTARKVQAEIISQKYKNIEFYDFNKY 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0938 607 Pfam SecY 252 583 IPR002208 GO:0015031|GO:0016020
Lele19g0938 607 SUPERFAMILY Preprotein translocase SecY subunit 192 590 IPR023201 -
Lele19g0938 607 Hamap Protein translocase subunit SecY [secY]. 188 600 IPR026593 -
Lele19g0938 607 TIGRFAM 3a0501s007: preprotein translocase, SecY subunit 199 596 IPR002208 GO:0015031|GO:0016020
Lele19g0938 607 ProSitePatterns Protein secY signature 2. 343 360 IPR030659 -
Lele19g0938 607 PANTHER SECY/SEC61-ALPHA FAMILY MEMBER 192 599 IPR002208 GO:0015031|GO:0016020
Lele19g0938 607 PRINTS Preprotein translocase SecY subunit signature 324 349 - -
Lele19g0938 607 PRINTS Preprotein translocase SecY subunit signature 350 373 - -
Lele19g0938 607 PRINTS Preprotein translocase SecY subunit signature 569 587 - -
Lele19g0938 607 PRINTS Preprotein translocase SecY subunit signature 292 315 - -
Lele19g0938 607 PRINTS Preprotein translocase SecY subunit signature 535 553 - -
Lele19g0938 607 PRINTS Preprotein translocase SecY subunit signature 200 218 - -
Lele19g0938 607 PRINTS Preprotein translocase SecY subunit signature 480 502 - -
Lele19g0938 607 PRINTS Preprotein translocase SecY subunit signature 250 270 - -
Lele19g0938 607 PRINTS Preprotein translocase SecY subunit signature 441 460 - -
Lele19g0938 607 Gene3D SecY subunit domain 191 596 IPR023201 -
Lele19g0938 607 ProSitePatterns Protein secY signature 1. 251 270 IPR030659 -
Lele19g0938 607 FunFam Preprotein translocase subunit SECY, chloroplastic 191 596 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0938 Lele-ChrLele19 5716941 5721481 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0938 105 607 Chloroplast and Mitochondria Gene Families AT2G18710 81.065 0.0 830