Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0936 ATGCTCTCGAGATCTTGCTTAGACTTGTTGAATTTGGTCTCCGTCGATGATTACAGAACTCTGAGCCGGATCCCAAAGGACATGGCGCTCCCCGGAGTTCTGCCCAAACTCGAAGTCCGCGATGATGCCGATTCCGGCGCGGGCTCCGACGATATCGTCTCCCCTGTTCCGCAGGAGCGCAGGATCATCGTCGCCAATCAGTTACCGATAAAATCGTTTCGTGACAACGAGACCAGAAAATGGAGTTTCGAATTCGATAGTGATAGTCTCTCTCTGCAGCTCAAAGACGGGTTTCCCTCCGACATCGAGGTTCTGTATGTGGGTTCCTTGAAAGCCGACATCGATCCATCCGAACAAGAAGAAGTGTCTCAAATATTACTCGAAAAGTTCCGTTGCGTGCCGACGTTTTTACCGGTCGAGATTCAGAACAAGTTCTACCATGGATTCTGCAAGCATTACCTCTGGCCGCTGTTTCACTACATGTTACCTATGTCGCAGAGTCATGGTGCCCGTTTTGAACGCTCGCAGTGGAAAGCTTACGTTTACGCCAACAAGATTTTCGCCGATAAGGTGACGGAGGTGATAAACCCAGAGGAGGATTACGTTTGGATTCACGATTATCATCTCATGATCTTACCTACCTTACTGAGAAGAAGGTTCCACAGAATAAAACTTGGATTTTTCCTCCACAGCCCATTTCCATCCTCTGAAATCTATAGAACAATCCCAGTTCGTGATGATATCCTTCGTGCTTTGTTAAATTGCGATTTAGTCGGTTTCCACACGTTTGATTACGCCAGACATTTCTTGTCCTGTTGCAGTAGAATGCTGGGTTTGGATTATGAATCCAAAAGGGGTTACATTGGGCTAGATTATTACGGCCGTACAGTGACGATCAAGATCTTGCCGGTGGGTATTCACATGGGTCAGCTCCAATCGTTGTTGTCGTTATCTCATACCGGTGATAGGATTAAGCAATTGAAGACACAATATGAGGGGAAGATTGTTATTCTTGGTGTGGATGATATGGATTTGTTCAAAGGTTTAAGCTTGAAGTTACTGGCAATGGAGCAACTCTTGGAGGTTAACGAAGATTTAAGGGGTAAAGTAGTTTTAGTCCAGATTCTGAACCCAGCAAGAAGCAAAGGGAAAGATATTCAAGATGTTCAAAATGAAATAAATTCAATCGCGAATGAGATCAACCAGAAATACGGCGAACCTGGATACCAACCAATCGTGTTCATTAACGGCCCTGTTTCGACGCAAGAGAAAGCCTCGTACTACGCCATTTCTGAATGCTGCGTTGTGAATGCTGTGAGAGATGGTATGAATTTAGTTCCTTATAAGTACACTGTTTGTAGACAGGGGTTCGATGCAACGAATGATTCGACAAGCCCTAAACGAAGCGTCATCATAGTGTCTGAATTTATTGGTTGTTCTCCGTCTCTGAGTGGAGCAATCAGAGTTAACCCATGGAACATCGAAGACGTCGCAGAGGCGATGAATTCGGCGATTACAATGTCAGATGCAGAGAAACAGTTGCGCCACGAAAAACATTACAAGTACATAAGTTCTCATGATGTAGCCTATTGGGCTAGAAGCTTCGATCAGGATTTAGAAAGAGCTTGTAGAGAACATTACCATAAGAGATGTTGGGGTGTTGGTTTTGGCTTGGGTTTTAGAATCGTGGCTCTTGATCCTACATTCAGGAAGCTTTCCGCAGAGAGCATTGTATCATCGTATAGAAACACACAGAGCAGGTTGATCCTTTTGGACTATGACGGTACTATGATGCCACAAGCTTCAGTCAACAAAGCCCCAAGCGAAGAGGTTATTTCTGTTTTGAATCACTTATGTAACGACCCCAGAAATATGGTGTTCATAGTCAGTGGCAGAGATAAGAATTGCCTCAGCAAGTGGTTTTCTCCATGCAAGAAGCTGGGCCTGTCAGCAGAACATGGCTTCTTTACTAGGTGGAGTTATGATAGTCCTTGGGAAACATGTGGGTTAGGAATGGATTTCGAATGGAAAAAGGCTGTAGAACCAGTGATGGCGCATTATACAGAAGCAACTGATGGTTCTTTCATTGAACCAAAAGAGAGTGCTCTGGTTTGGCACCACCAAGAAGCCGACCCTCATTTCGGATCGTCCCAAGCAAAAGAGCTTCTTGGTCACCTAGAAAGCGTGCTAGCCAATGAACCAGTAGTAGTAAAAAGAGGACAAAACATCGTTGAAGTAAAACCTCAGGGTGTCAACAAAGGAATAGTAGTCGATAATCTAATCTCAAGTATGCAGAGTAAGGGAAAAGCACCAGATTTTCTTTTGTGCATAGGAGACGATAGGTCAGATGAAGATATGTTTGAGAGCATTGCTGGTTCAAGCTCTGATCCAACCCAACTAGCTATAAAACATGTCTATGCCTGCACAGTGGGTCAGAAGCCAAGCATGGCAAGATATTATCTGGATGACACTGTTGAAGTCATCAAGTTACTCCAAGGACTATCATCCTCTGCATCACCATCACCCACAAAGTCCCAACACACTCAGGATCTTGACAAATACATAAACTTAACATAG 2577 0.4432 MLSRSCLDLLNLVSVDDYRTLSRIPKDMALPGVLPKLEVRDDADSGAGSDDIVSPVPQERRIIVANQLPIKSFRDNETRKWSFEFDSDSLSLQLKDGFPSDIEVLYVGSLKADIDPSEQEEVSQILLEKFRCVPTFLPVEIQNKFYHGFCKHYLWPLFHYMLPMSQSHGARFERSQWKAYVYANKIFADKVTEVINPEEDYVWIHDYHLMILPTLLRRRFHRIKLGFFLHSPFPSSEIYRTIPVRDDILRALLNCDLVGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLDYYGRTVTIKILPVGIHMGQLQSLLSLSHTGDRIKQLKTQYEGKIVILGVDDMDLFKGLSLKLLAMEQLLEVNEDLRGKVVLVQILNPARSKGKDIQDVQNEINSIANEINQKYGEPGYQPIVFINGPVSTQEKASYYAISECCVVNAVRDGMNLVPYKYTVCRQGFDATNDSTSPKRSVIIVSEFIGCSPSLSGAIRVNPWNIEDVAEAMNSAITMSDAEKQLRHEKHYKYISSHDVAYWARSFDQDLERACREHYHKRCWGVGFGLGFRIVALDPTFRKLSAESIVSSYRNTQSRLILLDYDGTMMPQASVNKAPSEEVISVLNHLCNDPRNMVFIVSGRDKNCLSKWFSPCKKLGLSAEHGFFTRWSYDSPWETCGLGMDFEWKKAVEPVMAHYTEATDGSFIEPKESALVWHHQEADPHFGSSQAKELLGHLESVLANEPVVVKRGQNIVEVKPQGVNKGIVVDNLISSMQSKGKAPDFLLCIGDDRSDEDMFESIAGSSSDPTQLAIKHVYACTVGQKPSMARYYLDDTVEVIKLLQGLSSSASPSPTKSQHTQDLDKYINLT 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0936 858 FunFam Alpha,alpha-trehalose-phosphate synthase 314 524 - -
Lele19g0936 858 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 586 703 - -
Lele19g0936 858 TIGRFAM T6PP: trehalose-phosphatase 586 834 IPR003337 GO:0003824|GO:0005992
Lele19g0936 858 Pfam Glycosyltransferase family 20 60 540 IPR001830 GO:0003824|GO:0005992
Lele19g0936 858 CDD GT20_TPS 60 540 IPR001830 GO:0003824|GO:0005992
Lele19g0936 858 Pfam Trehalose-phosphatase 590 823 IPR003337 GO:0003824|GO:0005992
Lele19g0936 858 MobiDBLite consensus disorder prediction 835 858 - -
Lele19g0936 858 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 716 849 - -
Lele19g0936 858 Gene3D - 670 749 - -
Lele19g0936 858 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 53 312 - -
Lele19g0936 858 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 588 789 IPR006379 -
Lele19g0936 858 SUPERFAMILY HAD-like 587 832 IPR036412 -
Lele19g0936 858 FunFam Trehalose-6-phosphate synthase 2 670 749 - -
Lele19g0936 858 Gene3D Glycogen Phosphorylase B; 55 312 - -
Lele19g0936 858 CDD HAD_TPP 588 829 - -
Lele19g0936 858 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 60 544 - -
Lele19g0936 858 Coils Coil 386 406 - -
Lele19g0936 858 Gene3D Glycogen Phosphorylase B; 313 524 - -
Lele19g0936 858 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 54 835 IPR001830 GO:0003824|GO:0005992
Lele19g0936 858 Gene3D - 589 821 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0936 Lele-ChrLele19 5700737 5703478 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0936 1 849 Trehalose Biosynthesis Gene Families AT2G18700 67.290 0.0 1207