Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0920 ATGAATTCTGAATTTGATGATCATTACTACCATTGTTCCATAATCATGGCTCTTCCTTGGGTTTATCTTCTCTTATTTCTCTCTTGTTCTGGACTCTGTTTCTCTTACGAGCCTCGTAACCATGAAGTGGAAGCGTTGATAAGCATAAGAGCTTCTTTGAATGATCTTCATGGAGTATTAAGCAACTGGGATGAAAACTCAGTAGACCCTTGTAGTTGGGCTATGATCACTTGCTCTTCTGATTCTCTTGTTATAGGCTTGGGAGCTCCAAGCCAATCTCTTTCTGGAACTTTATCTGCTGCCATGGGAAATCTGACAAATCTTCGACAAGTGTTACTGCAGAACAACAATATTTCTGGCCAAATCCCACCGGAACTTGGTAGCCTTCCTAAGTTACAGACTTTAGATCTTTCTAACAATCGATTCTCGGGTGTGATTCCCAGTTCCTTAAGTCACTTGGATGGTCTTAAGTACTTGAGGCTGAACAATAATAGCTTGTCTGGGCCCTTTCCTGTGTCACTAGCCAAAATCCCTCAACTTGCTTTCTTAGACTTGTCTTATAACAATCTTAGTGGACCTGTGCCGAAGTTTCCAGCGCGATCTCTCAATGTTGTGGGAAACCCATTAATTTGTGGGAGTAGTTCTACTGAAGGTTGCTCTGGATCAACAACCCTCTTGCCTGTTTCGTTCTCTCTTCCAACCTCACAAGGAAAGCACAAGTCCAAGAAAGTAGCGATTGCACTTGGGATTGGCCTTAGCTTTGCCTGTATCACACTGTTGTCTTTAGGACTTTCCTGGTATAGAAAGAAAAGACAGCACAGAGCACTTTTGTATATCAGTGATTATCAGGAAGATGGACTCATTCGCTTGGGGAATCTCAATATTTTCACTTTCAAAGAGCTCCAACATGCAACAGATAATTTCAGCTCTAAGAGCATACTTGGTGCTGGTGGTTTTGGCAATGTGTATCGAGGTAAGCTCGGAGATGGGACACTGGTTGCCGTTAAGAGGTTGAAGGATGTTACTGGAAGTGCTGGGGAATCACAGTTTCGAACTGAATTGGAGATGATCAGCTTGGCAGTTCACCGCAATTTACTTCGCTTAATCGGATATTGCGCTACTCCTAACGAGAAGCTTCTGGTTTATCCTTACATGTCTAATGGAAGTGTGGCATCCAGACTTAGAGGCAAACCGGCGCTAGATTGGAACACGAGAAAGAGGATAGCAATCGGAGCAGCGAGAGGTCTTCTGTATCTACATGAGCAGTGTGATCCAAAGATAATACATAGAGATGTTAAGGCTGCTAATGTGCTTCTGGATGAGTGCTATGAAGCCATTGTTGGTGATTTTGGCCTCGCTAAGCTCCTTGATCATGCTGACTCTCATGTCACTACCGCTGTTCGAGGCACTGTAGGGCACATCGCGCCAGAGTACCTCTCCACCGGCCAATCATCGGAAAAAACTGATGTGTTTGGATTTGGCATTCTCTTGTTGGAGCTCATAACTGGAATGACGGCTCTCAAGTTTGGGAAAACAGTGAATCAGAAAGGTGCAACGCTAGAGTGGGTGAAGAAAATACAGCAAGAGAAGAAGGTGGAAGTGTTGGTGGACAAAGAGTTAGGAACAAACTATGATAGGATAGAGGCGGGGGAGATGTTGCAAGTAGCTTTACTTTGCACTCAGAATCTACCGATTCACCGCCCCAAAATGTCGGAAGTGGTCCGAATGCTCGAAGGCGATGGCCTCGCCGACAAATGGGCGGCTTCACAGAATCACAATAATCTCAACCTGAACAACAATACCTTTCACAGACACAGTAACAACAATAGTTCATCTTCTTCTCGCCCAAGCACCACCACCACCCTTGCTTCAAAACATGATGATGATAATAATAATGCTCATGATCGTCCCACTATGTTTGGCATGGGAATTGATGGTGATGGTGATGATGATGATGAACACTCTTTGGATTCCTATGCCATGGAACTCTCTGGTCCTAGGATGGGACAGAAGAACATGATGAGATTCTTCTCTCAAGAACATCGTCGTCGTCGTCATCATCATCTGAGGTTGTCTCTTCCAGCTTCAGGGTATGGTAGTGACTGGTTTGAGAGAAGAAAGCGATGGATTTTGCTGTGTCTTGTGAGATGTTGTTGTTTGAAGTTGAAGGAGGTGGTCGCAAGTCTTGAGACTTTTGCTGTGAAAGAGGGTCATTTTCTAAGTGATGCTTTTGCAGCCCAGGACTATGTGAATTCTAAATCTCTAATGGCTTCTCAGTCATCTTCCCCTTCTCTCCTTTGTGCCTCTTTTAATCAGGATTATAGTTGCTTTGCCATTGGCACGAGGGATGGTTTCAGAATATTTGACACGAATACAGGAAGGCTCTGCTATGAAAGAGTTCTTGGAGCTTTCAGTATTGTTGAAATGTTATTTAGCTCAAGTCTTCTTGCAATTGTTGGTGCTGGTGAACAGCCATCTTTGTCCCCACGTCGACTCTGTTTATTCAATACAAAGACAGGAACCGCGCTTAGAGAATTGAACTTTCTGACCTCGATACTTGCTGTTCGCATGAACAAAAAAATGCTTATTGTCATTTTACAAGACAAAGTATATGTATATGACTTGAATAGTCTCACGATCTTGGACACTTTTGACACTGTGCCCAATATTAAAGGGCTATGTGCCTTTTCCCCTTGTTTAGAAGCTTGCTACTTGGCTCTTCCTGCTAGCACTACCAAGGGATCTGCTTTGTTATATAACGTCATGGATCGTCACTTACACTGTGAGATTGAGGCTCATCGCGCACCACTGGCTGCGATGGTCCTTTCTTTTAATGGAATGTATTTAGCTACAGCATCTGAGCAAGGAACCATGGTCAGAGTCCATTTGGTGACAGATGCAACAAAGTCATATAGCTTTCGAAGGGGGGCATATCCGTCTACAATATTTTCCCTGTCATTTGGGCCAGCAAAGCACCTTCCAGATATTCTTGCAGCTTCAAGTTCTTCTGGTTCTGTCCATCTTTTCACTCTTGGATTTGCTGCACATCAAAGAACCAGGAGATCTAGTGGTTTCCTTGGATCAATAATACCTGGTGCAGTAACTGATGCTTTGGATCCTGCTGATCATCGCATACTGCATAATGCTGTTCCTGCTGGGATAAAAAGCTATGCAATAATTCGTAAGGTTGAAAATGTGACTGACACCTCAACATCTGAAGTTCTAGCTTGTAGGGCCATTATGTCAATAATAACTTACAACGGCTACTTCCAGGAATACAATGTAAGCCTTGACACTCAGAATGAATTGTCTTGGACTTTAGTACGTGAATTCAATCTCTTGACAGTAACCTTGGATAAGGATAGGGCCTCAAGCTCATGA 3381 0.4348 MNSEFDDHYYHCSIIMALPWVYLLLFLSCSGLCFSYEPRNHEVEALISIRASLNDLHGVLSNWDENSVDPCSWAMITCSSDSLVIGLGAPSQSLSGTLSAAMGNLTNLRQVLLQNNNISGQIPPELGSLPKLQTLDLSNNRFSGVIPSSLSHLDGLKYLRLNNNSLSGPFPVSLAKIPQLAFLDLSYNNLSGPVPKFPARSLNVVGNPLICGSSSTEGCSGSTTLLPVSFSLPTSQGKHKSKKVAIALGIGLSFACITLLSLGLSWYRKKRQHRALLYISDYQEDGLIRLGNLNIFTFKELQHATDNFSSKSILGAGGFGNVYRGKLGDGTLVAVKRLKDVTGSAGESQFRTELEMISLAVHRNLLRLIGYCATPNEKLLVYPYMSNGSVASRLRGKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDECYEAIVGDFGLAKLLDHADSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMTALKFGKTVNQKGATLEWVKKIQQEKKVEVLVDKELGTNYDRIEAGEMLQVALLCTQNLPIHRPKMSEVVRMLEGDGLADKWAASQNHNNLNLNNNTFHRHSNNNSSSSSRPSTTTTLASKHDDDNNNAHDRPTMFGMGIDGDGDDDDEHSLDSYAMELSGPRMGQKNMMRFFSQEHRRRRHHHLRLSLPASGYGSDWFERRKRWILLCLVRCCCLKLKEVVASLETFAVKEGHFLSDAFAAQDYVNSKSLMASQSSSPSLLCASFNQDYSCFAIGTRDGFRIFDTNTGRLCYERVLGAFSIVEMLFSSSLLAIVGAGEQPSLSPRRLCLFNTKTGTALRELNFLTSILAVRMNKKMLIVILQDKVYVYDLNSLTILDTFDTVPNIKGLCAFSPCLEACYLALPASTTKGSALLYNVMDRHLHCEIEAHRAPLAAMVLSFNGMYLATASEQGTMVRVHLVTDATKSYSFRRGAYPSTIFSLSFGPAKHLPDILAASSSSGSVHLFTLGFAAHQRTRRSSGFLGSIIPGAVTDALDPADHRILHNAVPAGIKSYAIIRKVENVTDTSTSEVLACRAIMSIITYNGYFQEYNVSLDTQNELSWTLVREFNLLTVTLDKDRASSS 1126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0920 1126 Gene3D Transferase(Phosphotransferase) domain 1 385 597 - -
Lele19g0920 1126 Gene3D - 740 896 IPR015943 GO:0005515
Lele19g0920 1126 Gene3D - 897 1036 IPR015943 GO:0005515
Lele19g0920 1126 Pfam Leucine rich repeat 130 190 IPR001611 GO:0005515
Lele19g0920 1126 SUPERFAMILY L domain-like 40 212 - -
Lele19g0920 1126 Gene3D Ribonuclease Inhibitor 39 221 IPR032675 -
Lele19g0920 1126 SMART serkin_6 308 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele19g0920 1126 MobiDBLite consensus disorder prediction 599 626 - -
Lele19g0920 1126 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 21 588 - -
Lele19g0920 1126 SUPERFAMILY Protein kinase-like (PK-like) 291 578 IPR011009 -
Lele19g0920 1126 PRINTS Leucine-rich repeat signature 177 190 - -
Lele19g0920 1126 PRINTS Leucine-rich repeat signature 132 145 - -
Lele19g0920 1126 SMART LRR_typ_2 153 184 IPR003591 -
Lele19g0920 1126 SMART LRR_typ_2 105 128 IPR003591 -
Lele19g0920 1126 SMART LRR_typ_2 129 152 IPR003591 -
Lele19g0920 1126 ProSiteProfiles Protein kinase domain profile. 308 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele19g0920 1126 ProSitePatterns Protein kinases ATP-binding region signature. 314 336 IPR017441 GO:0005524
Lele19g0920 1126 Pfam Leucine rich repeat N-terminal domain 40 79 IPR013210 -
Lele19g0920 1126 SUPERFAMILY WD40 repeat-like 762 1011 IPR036322 GO:0005515
Lele19g0920 1126 FunFam Somatic embryogenesis receptor kinase 1 278 384 - -
Lele19g0920 1126 MobiDBLite consensus disorder prediction 599 647 - -
Lele19g0920 1126 Pfam Protein kinase domain 309 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele19g0920 1126 FunFam Autophagy-related protein 18b isoform A 827 1060 - -
Lele19g0920 1126 FunFam Putative LRR receptor-like serine/threonine-protein kinase 39 221 - -
Lele19g0920 1126 FunFam Somatic embryogenesis receptor-like kinase 1 385 597 - -
Lele19g0920 1126 Gene3D Phosphorylase Kinase; domain 1 278 384 - -
Lele19g0920 1126 ProSitePatterns Serine/Threonine protein kinases active-site signature. 427 439 IPR008271 GO:0004672|GO:0006468
Lele19g0920 1126 SMART WD40_4 751 789 IPR001680 GO:0005515
Lele19g0920 1126 SMART WD40_4 966 1010 IPR001680 GO:0005515
Lele19g0920 1126 SMART WD40_4 923 963 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0920 Lele-ChrLele19 5576417 5587123 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0920 14 523 Receptor kinase-like Gene Family AT2G23950 75.586 0.0 782
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Lele19g0920 Pkinase 5.8e-41 CL0016