Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0915 ATGGGGAAACAAAACAAGAACAGTAACCCTAAGGCAACTAATAACAGTACCAATCTAACAGCAACCACCACCACCAAGAAACGAACCAGGCGAAGTGTCCCCAGAGATTCACCTCTTCAACGTAGCTCAAAATACAGAGGAGTCACTAGACACCGATGGACAGGACGATATGAAGCTCATTTGTGGGACAAGAATTGTTGGAATGAGTCGCAGAACAAGAAAGGACGACAAGGTGCTTATGATGATGAAGAGGCTGCTGCACATGCTTATGATCTAGCAGCGTTGAAATACTGGGGTCAAGATACCATACTCAACTTTCCGTTATCGACCTATCTCAACGAAATGAAAGAAATGGAGGGTCAGTCAAGGGAAGAATATATTGGATCATTAAGAAGGAAAAGCAGTGGTTTTTCCCGGGGAGTCTCCAAATACAGAGGCGTGGCAAGACATCATCATAATGGAAGATGGGAGGCTCGCATTGGCAGAGTTTTCGGCAACAAATATCTTTATCTCGGCACTTATGCTACCCAAGAAGAAGCTGCCACAGCATATGATATGGCGGCCATCGAATACCGAGGGCTTAATGCTGTCACTAATTTTGACCTAAGTCGTTACATTAAGTGGCTTAAGCCCAATATTAATAACAGCGTCAACATGATTAATAACACTAGCTTTGAGTATGGAAGATTGATCCTTGTTGGTGACAAGATTGACCAGAAGATGACAAAGAAGGAAGAAGAACGCAAGCTTATTCTCACTGTATATGGCAACAGAAGAAAGGATATTTCGGGTATCTGGATTAGATTAACTGTTTGGTCCTCCTATTTACTTTCTGCTTCACTTGCAAGAATCATCCTAGGCAAGCTAACTGTAATACCAGAAAGTGATCCAGATCAGAGAAATATCAGAAGAGAACTCAAGGCATTATATGCTCCATTACTTCTGGTCCAAATAGGAATCCCAGACGCCATAACTGCGTACTACATTGAAGATAACAGATTGGGAGTGAGACAAGTTATTGGCTTTGTTTTTCCAATTGTCTGGGCTTTGAAGTCAGCTCTCAGTAAGAAATCTGGTATCATCACTGTTAAAGAAATTGACAAAGAAGCAAGCATGCCTGCATTGTTCAGAATGCTTCCTCACAATGTCCCTCGCATAGAACTCATCTTAATGGCTTATTATCGGTTTCGCTTGTTGAAGCCTCACCGCGAGAACTGGCTGGCCTCTTTATGA 1233 0.4234 MGKQNKNSNPKATNNSTNLTATTTTKKRTRRSVPRDSPLQRSSKYRGVTRHRWTGRYEAHLWDKNCWNESQNKKGRQGAYDDEEAAAHAYDLAALKYWGQDTILNFPLSTYLNEMKEMEGQSREEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYATQEEAATAYDMAAIEYRGLNAVTNFDLSRYIKWLKPNINNSVNMINNTSFEYGRLILVGDKIDQKMTKKEEERKLILTVYGNRRKDISGIWIRLTVWSSYLLSASLARIILGKLTVIPESDPDQRNIRRELKALYAPLLLVQIGIPDAITAYYIEDNRLGVRQVIGFVFPIVWALKSALSKKSGIITVKEIDKEASMPALFRMLPHNVPRIELILMAYYRFRLLKPHRENWLASL 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0915 410 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 15 215 - -
Lele19g0915 410 Gene3D AP2/ERF domain 142 203 IPR036955 GO:0003700|GO:0006355
Lele19g0915 410 Gene3D AP2/ERF domain 43 109 IPR036955 GO:0003700|GO:0006355
Lele19g0915 410 Pfam AP2 domain 43 99 IPR001471 GO:0003700|GO:0006355
Lele19g0915 410 Pfam AP2 domain 142 193 IPR001471 GO:0003700|GO:0006355
Lele19g0915 410 CDD AP2 142 203 IPR001471 GO:0003700|GO:0006355
Lele19g0915 410 SUPERFAMILY DNA-binding domain 43 109 IPR016177 GO:0003677
Lele19g0915 410 PRINTS Ethylene responsive element binding protein signature 183 203 IPR001471 GO:0003700|GO:0006355
Lele19g0915 410 PRINTS Ethylene responsive element binding protein signature 45 56 IPR001471 GO:0003700|GO:0006355
Lele19g0915 410 MobiDBLite consensus disorder prediction 1 27 - -
Lele19g0915 410 ProSiteProfiles AP2/ERF domain profile. 44 107 IPR001471 GO:0003700|GO:0006355
Lele19g0915 410 MobiDBLite consensus disorder prediction 1 47 - -
Lele19g0915 410 SUPERFAMILY DNA-binding domain 142 203 IPR016177 GO:0003677
Lele19g0915 410 FunFam AP2-like ethylene-responsive transcription factor 43 109 - -
Lele19g0915 410 FunFam AP2-like ethylene-responsive transcription factor 142 203 - -
Lele19g0915 410 ProSiteProfiles AP2/ERF domain profile. 143 201 IPR001471 GO:0003700|GO:0006355
Lele19g0915 410 Pfam Domain of unknown function (DUF4220) 272 355 IPR025315 -
Lele19g0915 410 SMART rav1_2 44 113 IPR001471 GO:0003700|GO:0006355
Lele19g0915 410 SMART rav1_2 143 207 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0915 Lele-ChrLele19 5543263 5549192 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0915 129 215 AP2-EREBP Transcription Factor Family AT1G72570 39.583 9.52e-10 58.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Lele19g0915 DUF4220 2.6e-10 No_clan