Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0898 ATGCAGCAAGGTGATCAGACGGTAATTAGCTTGAGGCCTGGTGGTGGTCGTCCCGGCGGCGGTAGCAGGTTCCTTGCTCCTCGATTCGACTCATCCTCATCGGCTCCCTCTACTCTTGCTTTCGGTTCCTTTGCCTCTGATTCTTCTCGTCCCCATGGCGGTGCTCCTTCTTCGTTTTCTATTAAGGCTGGAGATTCACGGTTTGAGGGTCGTGAGCTTGTGCGATACACTAGGGATCAGCTTTTACAACTGAGGGAGGTCGGTGAGATCCCTGAAGATATTTTAAAAATTAAACGAGATATAGAAACTGAACTCTTTGGCGAAGATCAAAGCTGGGGCCGTGCAGAAAATTCTGCACAACAATTTCAAAATCGATACTCTGAGCCAGACAGCCGTGATTGGCGTGGCCGGTCTGGGCAACTTCCTGCTTCTGCAGAAGAGAAGTCATGGGAAAATCTGAGAGAAAATACAGAGTTTGGAAATCGGTTTGATTCAAGGCAGCAGGATCGTCAGGATCAACTGAGTTCCCAGTTTGCAAGGACAAATATTTCTTCTAATCAAGGAGGACCTGCTCCAACTTTAGTCAAGGCTGAGGTTCCATGGTCAGCTAGAAGAGGAAACCTATCTGAAAAGGATCGTGTCTTAAAAACCGTTAAAGGAATTCTAAACAAGCTTACCCCTGAGAAATTTGATGTCCTGAAGGGTCAATTGATTGATTCTGGAATTACATCTGCTGACATCTTGAAGGAAGTCATTGAACTGATATTTGATAAGGCTGTACTAGAACCAACATTTTGCCCCATGTATGCTCTTCTTTGTTCAGATCTTAATGAAAAGCTGCCTCCTTTCCCATCTGATGAGCCTGGTGGGAAAGAGATCACTTTTAAGCGAGTACTCTTGAATAACTGTCAGGAGGCTTTTGAAGGCGCTGATAAAATGAGGGAGGAAGTGAGGCAGATGACTGCTCCTGAGCAGGAGATGGAGCGTAGGGATATGGAAAGACTGGTGAAGCTTCGTACTCTTGGGAACATCCGACTAATTGGGGAGCTGTTGAAGCAGAAGATGGTTCCTGAGAAGCTTGTCCATCACATTGTTCAGGAACTTTTGGGACCTCCTGATAGCAAGTCATGTCCAGTTGAGGAAAACGTTGAAGCCATATGTCAGTTTTTCAATACTATTGGTAAACAACTTAACGAAAGCCAAAAATCACGGCGAATTAATGACATGTATTTTAGCCGATTGAAAGAACTGAGCTCAAACCCCCAACTTGTATCACGGTTGAGGTTCATGATTCGTGATGTTCTAGATTTACGTGCTAATAACTGGGTTCCAAGACGTGAAGAGGTGAAAGCAAAAACCATCACTGAAATTCATTCAGAAGCTGAAAAGAATCTTGGATTGCGGCCAGGTGCTACCGCAAGCATTAGAAATAACCGTGCTGGAGCTTCTGGTGTTCAAGGAAATATAAGTCCTGGTGGATTTCCAATTGCTCGACCTGGTACAGGAGGTATGATGCCTGGAATGCCAGGGACCAGGAAGATGCCTGGGATGCCTGGAATTGATAATGACAACTGGGAAATGCCTAGGAGATCAATGCCAAGAGGAGACATGTCGGGTATGCAAGCTGCAGGACGTGGCCAGTCTCCTTTACATGTGAAGTCATCAGCCATGAACTCAAAGCTATTACCTCAAGGTAGTGGTGGTCTCATAAGTGGAAGAAGCAGTGCCCTAGTGCATGGTGGCGGTGCTCCTCCTTCTCGTCCATCAAACTTTGTTTCTGGCACTGAGCCTGCATCTCAAATCCCTACGTCTGAGAAAGCTGTTCCTCCTAGCGGGTCTGTTGAGAAGCCACAGACTCCAGCTCCAAAATTAAGTTTGGATGAACTTCACCGCAAAACTGTCTCTCTTCTGGAAGAATATTTCAGTGTTCGTCTCAAAGACGAGGCATTGCGGTGTATGGAAGAACTAAAGGCTCCATCTTACCACCCTGAGTTTGTTAAGGAGGCCATTGCCCTTGCACTTGATAAAAGTCCACCCTGTGGTGATATTGTCGCCAATCTTCTTGAGCATCTTTTTATTGAGAAGATTCTTACTGCTAGAGATATAGGGACTGGCTGTTTGTTGTTTGGTTCCATGCTAGACGACATCGGCATAGATTTACCTAAAGCACCAAATAACTTTGGTGAGATAATTGGGAAGCTAATTTTGGCCGGGGGATTGGATTTTAAGGTAGTGACAGAGATCCTTAAGAAGGTGGAAGATGACTATTTCCAGAAAGCAATATTTGATGCTGCAACAAGGATCGTTAGCTCTGCATCTGGGCAAGCTCTTTTAGATTCACAAGCAGCTGATATCGAGGCTAGCCGCAGCGTGCTCAAGTGA 2382 0.4551 MQQGDQTVISLRPGGGRPGGGSRFLAPRFDSSSSAPSTLAFGSFASDSSRPHGGAPSSFSIKAGDSRFEGRELVRYTRDQLLQLREVGEIPEDILKIKRDIETELFGEDQSWGRAENSAQQFQNRYSEPDSRDWRGRSGQLPASAEEKSWENLRENTEFGNRFDSRQQDRQDQLSSQFARTNISSNQGGPAPTLVKAEVPWSARRGNLSEKDRVLKTVKGILNKLTPEKFDVLKGQLIDSGITSADILKEVIELIFDKAVLEPTFCPMYALLCSDLNEKLPPFPSDEPGGKEITFKRVLLNNCQEAFEGADKMREEVRQMTAPEQEMERRDMERLVKLRTLGNIRLIGELLKQKMVPEKLVHHIVQELLGPPDSKSCPVEENVEAICQFFNTIGKQLNESQKSRRINDMYFSRLKELSSNPQLVSRLRFMIRDVLDLRANNWVPRREEVKAKTITEIHSEAEKNLGLRPGATASIRNNRAGASGVQGNISPGGFPIARPGTGGMMPGMPGTRKMPGMPGIDNDNWEMPRRSMPRGDMSGMQAAGRGQSPLHVKSSAMNSKLLPQGSGGLISGRSSALVHGGGAPPSRPSNFVSGTEPASQIPTSEKAVPPSGSVEKPQTPAPKLSLDELHRKTVSLLEEYFSVRLKDEALRCMEELKAPSYHPEFVKEAIALALDKSPPCGDIVANLLEHLFIEKILTARDIGTGCLLFGSMLDDIGIDLPKAPNNFGEIIGKLILAGGLDFKVVTEILKKVEDDYFQKAIFDAATRIVSSASGQALLDSQAADIEASRSVLK 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0898 793 MobiDBLite consensus disorder prediction 27 55 - -
Lele19g0898 793 ProSiteProfiles MI domain profile. 628 750 IPR003891 -
Lele19g0898 793 MobiDBLite consensus disorder prediction 113 127 - -
Lele19g0898 793 MobiDBLite consensus disorder prediction 1 64 - -
Lele19g0898 793 MobiDBLite consensus disorder prediction 534 553 - -
Lele19g0898 793 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 58 776 IPR045208 GO:0003743
Lele19g0898 793 Gene3D - 621 788 - -
Lele19g0898 793 MobiDBLite consensus disorder prediction 112 151 - -
Lele19g0898 793 Pfam MIF4G domain 215 441 IPR003890 GO:0003723|GO:0005515
Lele19g0898 793 MobiDBLite consensus disorder prediction 559 621 - -
Lele19g0898 793 SMART if4_15 215 441 IPR003890 GO:0003723|GO:0005515
Lele19g0898 793 Gene3D - 206 442 - -
Lele19g0898 793 MobiDBLite consensus disorder prediction 588 607 - -
Lele19g0898 793 SUPERFAMILY ARM repeat 208 444 IPR016024 -
Lele19g0898 793 SMART ma3_7 629 741 IPR003891 -
Lele19g0898 793 FunFam Eukaryotic translation initiation factor isoform 4G-2 206 442 - -
Lele19g0898 793 Pfam MA3 domain 630 741 IPR003891 -
Lele19g0898 793 SUPERFAMILY ARM repeat 622 771 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0898 Lele-ChrLele19 5439676 5444996 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0898 1 791 Eukaryotic Initiation Factors Gene Family AT5G57870 65.119 0.0 969