Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0896 ATGCAGCAAGGTGATCAGACGGTAATTAGCTTGGGCTCGGGGCCTGGTGGTGGTCGTCCAGGCGGCGGTAGCAGGTTCCTTGCTCCTCGATTCGACTCATCCTCATCGGCTTCCTCTACTCTTGCTTTTGGTTCCTTTGCCTCTGATCCTTCTCGTCCCCATGGCGGTGTTCCTTCTTCGTTTTCTGTTGAGGGAGGACCTGCTCCAACTTTAGTCAAGGCTGAGGTTCCATGGTCAGCTAGAAGAGGAAACCGATCTGAAAAGTATCGTGCCTTAAAAACCGTTAAACGAATTCTATACAAGCTTACCCAATTTTATGTCCTGAAGGGTCAATTGATTGATCATGGAATTACATCTGCTGACGTCTTGAAGGAAGTCGTTTCACTGATATATGATAAGGCGGTACTAGAACCAACATTTTGCCCCATGTGTGCTCTTCTTTGTTCAGATCTTAACAAAAAGCTGCCTCCTTTCCCATCTGAAGAGCCTGGTGGGAAAGAGATCACTTTTAAGCGAGTACTCTTGAATAACTGTCAGGAGGCTTTTGAAGGCGCTGATAAACTGAGGGAGGAAGTGAGGCAGATGACTGCTCCTGAGCAGGAGATGGAGCGTAGGGATATGGAAAGACTGGTGAAGCTTCGTACTCTTGGGAACATCCGACTAATTGGGGAGCTGTTGAAGCAGAAGATGGTTCCTGAGAAGATTGTCCATCACATTGTTCAGGAACTTTTGGGACCTCCTGATAGCAAGTCATGTCCAGTTGAGGAAAACGTTGAAGCCATATGTCAGTTTTTCAATACTATTGGTAAACAACTTGACGAAAGCCAAAAATCACGGCGTATTAATGACATGTATTTTAGCCGTTTGAAAGAACTGAGCTCAAACCCCCAACTTGTCTCACGGTCAAGGCTTATGATTTGCGCTGTTTTAGATTTACGTGCTAATAACTGGGTTCCAAGACGTGAAGAGGGAGGACCTGCTCCAACTTTAGTCAAGGCTGAGGTTCCATGGTCAGCTAGAAGAGGAAACCGATCTGAAAAGTATCGTGCCTTAAAAACCGTTAAACGAATTCTATACAAGCTTAACCAATTTCATGTCCTGAAGGGTCAATTGATTGATTATGGAATTACATCTGCTGACAACTTGAAGGAAGTCGTTTCACTGATATTTGATAAGGCTGTACTAGAACCAACATTTTGCCCCATGTATGCTCTTCTTTGTTCAGATCTTAACGAAAAGCTGCCTCCTTTCCCATCTGATGAGCCTGGTGGGAAAGAGATCACTTTTAAGCGAGTACTCTTGAATAACTGTCAGGAGGCTTTTGAAGGCGCTGATAAACTGAGGGAGGAAGTGAGGCAGATGACTGCTCCTGAGCAGGAGATGGAGCGTAGGGATATGGAAAGACTGGTGAAGCTTCGTACTCTTGGGAACATCCGACTAATTGGGGAGCTGTTGAAGCAGAAGATGGTTCCTGAGAAGATTGTCCATCACATTGTTCAGGAACTTTTGGGACCTCCTGATAGCAAGTCATGTCCAGTTGATGAAAACGTTGAAGCCATATGTCAGTTTTTAAATACCATTGGTAAACAACTTGACGAAAGCCAAAAATCACGGCGTATTAATGACATGTATTTTAGCCGATTGAAAGAACTGAGCTCAAACCCCCAACTTGTGTCACGGTCGAGGCTCATGATTCGCGATGTTCTAGATTTACGTGCTAATAACTGGGTTCCAAGACATGAAGAGTTAGACTAA 1755 0.4467 MQQGDQTVISLGSGPGGGRPGGGSRFLAPRFDSSSSASSTLAFGSFASDPSRPHGGVPSSFSVEGGPAPTLVKAEVPWSARRGNRSEKYRALKTVKRILYKLTQFYVLKGQLIDHGITSADVLKEVVSLIYDKAVLEPTFCPMCALLCSDLNKKLPPFPSEEPGGKEITFKRVLLNNCQEAFEGADKLREEVRQMTAPEQEMERRDMERLVKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGPPDSKSCPVEENVEAICQFFNTIGKQLDESQKSRRINDMYFSRLKELSSNPQLVSRSRLMICAVLDLRANNWVPRREEGGPAPTLVKAEVPWSARRGNRSEKYRALKTVKRILYKLNQFHVLKGQLIDYGITSADNLKEVVSLIFDKAVLEPTFCPMYALLCSDLNEKLPPFPSDEPGGKEITFKRVLLNNCQEAFEGADKLREEVRQMTAPEQEMERRDMERLVKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGPPDSKSCPVDENVEAICQFLNTIGKQLDESQKSRRINDMYFSRLKELSSNPQLVSRSRLMIRDVLDLRANNWVPRHEELD 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0896 584 MobiDBLite consensus disorder prediction 1 40 - -
Lele19g0896 584 Gene3D - 342 576 - -
Lele19g0896 584 Gene3D - 92 329 - -
Lele19g0896 584 Pfam MIF4G domain 92 316 IPR003890 GO:0003723|GO:0005515
Lele19g0896 584 Pfam MIF4G domain 351 575 IPR003890 GO:0003723|GO:0005515
Lele19g0896 584 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 330 582 IPR045208 GO:0003743
Lele19g0896 584 FunFam Eukaryotic translation initiation factor isoform 4G-2 342 576 - -
Lele19g0896 584 SUPERFAMILY ARM repeat 343 578 IPR016024 -
Lele19g0896 584 SUPERFAMILY ARM repeat 84 319 IPR016024 -
Lele19g0896 584 FunFam Eukaryotic translation initiation factor isoform 4G-2 83 317 - -
Lele19g0896 584 SMART if4_15 351 575 IPR003890 GO:0003723|GO:0005515
Lele19g0896 584 SMART if4_15 92 316 IPR003890 GO:0003723|GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0896 Lele-ChrLele19 5426179 5430601 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0896 325 583 Eukaryotic Initiation Factors Gene Family AT2G24050 70.881 9.89e-124 380