Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0872 ATGGCAGGGACTGGAGTTTTTGCAGAGATTTTTGATGGAGAAATGTACAAGTATTACGCTGATGGAGAATGGAAGAAGTCTTCTTCTGGGAAAAGCGTTCCTATTATTAATCCCACTACCAGAAAGACTGAGTACAAAGTTCAGGCTTGTACACAAGAAGATGTCAATAAGCAGCCATTCTTAAAGAACACAGCTCCAATTGCAGAGTGTCTTGTGAAAGAAATAGCAAAACCAGCTAAAGATTCAGTTACAGAGGTTGTGAGATCTGGGGATCTGGTTTCTTACTGTGCTGAAGAAGGTGTAAGGATTCTGGGAGAGGGCAAGTTCTTGGTATCAGATAGTTTTCCTGGAAATGAAAGAACCAAGTATTGTCTCACATCCAAGATTCCATTGGGAGTAGTTTTAGCCATCCCACACTTTAATTATCCTGTAAATCTTGCTGTCTCAAAGATTGCTCCTGCACTTATTGCTGGAAACTCCCTCGTGCTCAAGCCTCCTACTCAGGGAGCGGTTTCTTGTCTGCATATGGTGCACTGCTTTCACTTGGCTGGTTTTCCCAAAGGCCTAATCAGCTGTGTCACTGGCAAAGGCTCTGAGATTGGTGATTTCCTTACAATGCAGCCAGGAGTGAACTGTATAAGCTTCACTGGTGGAGATACTGGCATTTCAATTTCGAAAAAATCAGGCATGATCCCTCTGCAAACGGAGTTGGGAGGAAAAGATGCCTGCATTGTACTTGAAGATGCTGACCTTGATTTGGTAGCTTCCAACATTATAAAAGGAGGCTTCTCATACAGTGTGAATTTCCATCTTCAAATGCAGAGCTATAAAATGAATTGCTCCGAGCCATCAGTGATGGAATCTGTTGCTGATGCTTTGGTGGAGAAAGTTAAGGCTAAGGTGGCAAAACTGACTGTGGGGCCACCGAAAAATAACTGTGATATCACTCCGGTGGTGACAGAGTCATCGGCAAACTACCTCGAAGGTCTTGTAATAGATGCTAAGGAGAAAGGAGCAACATTCTGCCAAGAGTACAAGAGAGAAGGAAACGTTATTTGGCCATTGCTTCTAGATAATGTCAGGCCTGATATGAGAATCGCATGGGAGGAGCCATTTGGACCAGTCTTGCCCGTCATTAGAATCAATTCTGTTGAAGAAGGAATCCACCATTGCAATGCTAGCAATTTTGGACTTCAGGGCCGTGTCTTCACAAAGGATGTGAACAAAGCAATTTTGATCAGTGATGCAATGGAAACAGGAACGGTTCAGATAAACTCAGCCCCAGCCCGAGGACCCGATCATTTCCCCTTCCAGGGTATTAAGGACAGTGGAATTGGATCACAAGGGATTACAAACAGCGTAAACATGATGACCAAGGTCAAGACCACTAGGATAGTGCGAGGCAGTTTCTGTGGAAACTCTCGAAAAGAACCGTTTTCTTCTTCTTCTCTTTCTCGTTTCTAG 1464 0.4378 MAGTGVFAEIFDGEMYKYYADGEWKKSSSGKSVPIINPTTRKTEYKVQACTQEDVNKQPFLKNTAPIAECLVKEIAKPAKDSVTEVVRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVVLAIPHFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVSCLHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMQPGVNCISFTGGDTGISISKKSGMIPLQTELGGKDACIVLEDADLDLVASNIIKGGFSYSVNFHLQMQSYKMNCSEPSVMESVADALVEKVKAKVAKLTVGPPKNNCDITPVVTESSANYLEGLVIDAKEKGATFCQEYKREGNVIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGRVFTKDVNKAILISDAMETGTVQINSAPARGPDHFPFQGIKDSGIGSQGITNSVNMMTKVKTTRIVRGSFCGNSRKEPFSSSSLSRF 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0872 487 SUPERFAMILY ALDH-like 15 463 IPR016161 GO:0016491
Lele19g0872 487 Pfam Aldehyde dehydrogenase family 62 462 IPR015590 GO:0016491
Lele19g0872 487 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 8 57 IPR016162 GO:0016491
Lele19g0872 487 FunFam NADP-dependent glyceraldehyde-3-phosphate dehydrogenase 239 436 - -
Lele19g0872 487 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 240 436 IPR016163 GO:0016620
Lele19g0872 487 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 62 237 IPR016162 GO:0016491
Lele19g0872 487 PANTHER ALDEHYDE DEHYDROGENASE 62 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0872 Lele-ChrLele19 5286422 5294197 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0872 1 465 Aldehyde Dehydrogenase Gene Family AT2G24270 81.250 0.0 810