Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0856 ATGGCGTCTCAGAATCTGACTGAGTATGAACGGAAGAGACTCGAGAATATTCGCCGCAACGATGAAATGTTGGCTGCTCTTAAGGTACATTCCAAAGCCTACGAGGTATCCTCCGCAGCCAAGCGCTCAAGAGTTGCATCAAAATCTTACGCTGTGAAATCTGAAAAGAAGCCTAAAACGGAAACCCCAGTGGTGATCCGACGGTCCTTGCGAACCAGAGGTATGCCACCCGATTCCGAGGGTTTGAAGGATGTGGCTTTGGAATCAGTCAATGTTACGGAGGAATCCCCAGCCAAAGTGCTGGGTCCTCTTTCCATGAAAGATGCTTACGAAGGGGATGAATTTGACCGCTCCCTCGTTGAAGCAATTGTGGGTTTGGCTAATAAGGAAGCTCATTCTTGTGCGTTGAATGGAGAAGAAATTGGTAGCTGCACAGATGGGGATGCTTTAAATGACATTAAGGAAAGAAGCGTTGGGACTTCCTGTGATTTAGAAAGGAGAAAGGAGGAATACAAGGTCTGGGGTTCGTTGAAGTTGGAATCGCTGACTTTGGATTCCGAGAACAGAGCAAGGCTTGTTCCTTCAAGGATAACTGCTGCACGATTTTTTCCTTCAAACAGTGTGAAGATGATCGTGGCAGGTGATAAACTTGGAAATCTTGGATTCTGGGATTGTGATTCGGGCAATAATGAAGGAAATGAAGTTCATTTATACCACCCCCATCCAGCTGCCATTTCTGGGATCTTGGTTCAAAGACATTGCTTGTCTAAGATTTACACAAGTTGTTATGATGGATTGGTTCGTCTTATGGATGCTGAAAAGGAGATTTTTGACCTGGTGTTTAACGGGGATGAAACTTTATACTCTCTTTCACAGCCAAACAATGATGCAAACTGCCTATATTTTGGCAATGGTCCTGGAGGTTTGACCATTTGGGACAGCAGGACAGGGAAATGTTCATCCCAATGGGTTTTGCATGATAGTAGGATTAATACTATAGATTTCAACCCAGAAAACCTTCACATTATGGCAACTAGTTCTTCTGATGGAACTGCCTGCACCTGGGATTTGAGATATAATAAAAAGTCTAAGCCGAGTGCCCTGAAGACATTTACTCACCAAAGGGCTGTGCATTCTGCTTACTTCTCCCCTTCTGGGAGTTCTCTGGCAACTACTAGCCTGGACAACACGATTGGTATATATGATGGAGTGAACTTCGAGAATGCATCCACTATGTTCCACTTCAACCAGACTGGCAGATGGCTTTCTACCTTCAGAGGAATATGGGGTTGGGATGATTCCTATATCTTCGTTGGCAATATGAAAAGAGGAGTCGACGTTATCTCCCCTGTTCACAAGAAAGTTATCATGACTCTGCAGAGTCCACACATGTCTGCCATTCCATGCAGGTTTGATGCTCACCCTTTTGAGATTGGGACTCTTGCGGGAGCTACCAGTGGGGGACAGGTTTATGTGTGGACATCATCATCCTAA 1494 0.4491 MASQNLTEYERKRLENIRRNDEMLAALKVHSKAYEVSSAAKRSRVASKSYAVKSEKKPKTETPVVIRRSLRTRGMPPDSEGLKDVALESVNVTEESPAKVLGPLSMKDAYEGDEFDRSLVEAIVGLANKEAHSCALNGEEIGSCTDGDALNDIKERSVGTSCDLERRKEEYKVWGSLKLESLTLDSENRARLVPSRITAARFFPSNSVKMIVAGDKLGNLGFWDCDSGNNEGNEVHLYHPHPAAISGILVQRHCLSKIYTSCYDGLVRLMDAEKEIFDLVFNGDETLYSLSQPNNDANCLYFGNGPGGLTIWDSRTGKCSSQWVLHDSRINTIDFNPENLHIMATSSSDGTACTWDLRYNKKSKPSALKTFTHQRAVHSAYFSPSGSSLATTSLDNTIGIYDGVNFENASTMFHFNQTGRWLSTFRGIWGWDDSYIFVGNMKRGVDVISPVHKKVIMTLQSPHMSAIPCRFDAHPFEIGTLAGATSGGQVYVWTSSS 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0856 497 FunFam WD repeat-containing protein 76 188 495 - -
Lele19g0856 497 SMART WD40_4 231 271 IPR001680 GO:0005515
Lele19g0856 497 SMART WD40_4 316 356 IPR001680 GO:0005515
Lele19g0856 497 SMART WD40_4 364 402 IPR001680 GO:0005515
Lele19g0856 497 SMART WD40_4 185 224 IPR001680 GO:0005515
Lele19g0856 497 SMART WD40_4 452 494 IPR001680 GO:0005515
Lele19g0856 497 ProSiteProfiles Trp-Asp (WD) repeats profile. 370 402 IPR001680 GO:0005515
Lele19g0856 497 ProSitePatterns Trp-Asp (WD) repeats signature. 343 357 IPR019775 -
Lele19g0856 497 SUPERFAMILY WD40 repeat-like 193 493 IPR036322 GO:0005515
Lele19g0856 497 PANTHER UNCHARACTERIZED 4 495 - -
Lele19g0856 497 Gene3D - 188 496 IPR015943 GO:0005515
Lele19g0856 497 ProSiteProfiles Trp-Asp (WD) repeats profile. 323 365 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0856 Lele-ChrLele19 5185130 5187760 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0856 196 448 U-box Gene Family AT1G04510 24.254 5.04e-07 50.4