Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0840 ATGTGTTTACAGGAAGCCGAGCAAGTTGGCGCCGATATGGAGAACCCAGATGATAGAAGAAGGTCTTGGCCTTTGCATTGTGACCTCTTGCATACCCACATGGAAGAAGAACCTCCTTTTAGAACTTCCGCCGATCGGAGTTTTAGTGTTGTGAATTCATTTCCGCTGGAAAGCATAAGTGAAGACACAGTGATTGCGGACAAAAAGCAGAACCAGATGAACTTTGTCCCTGCTCTGCGATCTGGCGAGTGGTCAGATATCGGTGGTCGCCCTTATATGGAAGATACTCACATCTGCATTGGAGACTTAGGAAAGAAGTTTGGTTATGGTGAACTCAGTGAGGAAGTTATTTCCTTTTATGGGGTATTTGATGGACACGGAGGGAAGAGCGCTGCGGTATTCGTCCGTGATCATCTTCCAAGAGTTATTATTGAGGATGCTGATTTTCCTATGGAGCTAGAGAAGGTGGTCACAAGGTCATTTTTACAGACAGATGCTGCATTTGCAGAGACATGTTCCCTTGAGTCTTCATTGTCTTCTGGTACAACTGCATTAACTGCCATTATTTTTGGGAGATCTTTGCTAGTGGCCAATGCTGGGGACTGCAGGGCTGTTTTGTCCAGACGTGGAAGGGCGATGGAGATGTCAAAAGACCATAGGCCCTTCTGCCTGAAAGAGAGGAAGCGAGTCGAGTCTCTGGGGGGATTCGTTGATGACGGTTATCTGAATGGTCAGTTAGGTGTCACACGGGCGCTAGGCGACTGGCATCTTGAGGGCTTGAAGGAAATGAGTGAAAGAGGAGGACCTTTAAGTGCTGAACCAGAACTTAAACTGACCGCACTGACCAAAGAAGATGAGTTTTTGATAATTGGAAGTGATGGGATTTGGGATGTTTTCAGCAGCCAAAATGCTGTAGATTTTGCAAGAAGGAGGCTTCAAGAACATAACGATGTGAAACTATGCTGTAAGGAGATGGTGGGGGAAGCCCTAAAGAGAGACTCAACAGATAACTTAACTGTTGTGATGGTGTGTTTTCACTCAGAACCACCACCACCTGTGGTGGTAGAGAGGCCAAGATTCAGAAGAAGCATATCTGCTGAGGGACTTCAGAATCTCAAGTCCTTCCTGAACTGA 1134 0.463 MCLQEAEQVGADMENPDDRRRSWPLHCDLLHTHMEEEPPFRTSADRSFSVVNSFPLESISEDTVIADKKQNQMNFVPALRSGEWSDIGGRPYMEDTHICIGDLGKKFGYGELSEEVISFYGVFDGHGGKSAAVFVRDHLPRVIIEDADFPMELEKVVTRSFLQTDAAFAETCSLESSLSSGTTALTAIIFGRSLLVANAGDCRAVLSRRGRAMEMSKDHRPFCLKERKRVESLGGFVDDGYLNGQLGVTRALGDWHLEGLKEMSERGGPLSAEPELKLTALTKEDEFLIIGSDGIWDVFSSQNAVDFARRRLQEHNDVKLCCKEMVGEALKRDSTDNLTVVMVCFHSEPPPPVVVERPRFRRSISAEGLQNLKSFLN 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0840 377 Gene3D - 60 349 IPR036457 -
Lele19g0840 377 SMART PP2C_4 70 343 IPR001932 -
Lele19g0840 377 PANTHER PROTEIN PHOSPHATASE 2C 67 343 IPR015655 GO:0004722|GO:0006470
Lele19g0840 377 ProSitePatterns PPM-type phosphatase domain signature. 119 127 IPR000222 GO:0043169
Lele19g0840 377 CDD PP2Cc 80 345 IPR001932 -
Lele19g0840 377 FunFam Probable protein phosphatase 2C 22 64 348 - -
Lele19g0840 377 SUPERFAMILY PP2C-like 73 347 IPR036457 -
Lele19g0840 377 Pfam Protein phosphatase 2C 92 337 IPR001932 -
Lele19g0840 377 ProSiteProfiles PPM-type phosphatase domain profile. 80 345 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0840 Lele-ChrLele19 5092067 5095088 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0840 20 377 PP2C-type Phosphatase Gene Family AT2G25620 56.111 5.61e-139 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBP Lele19g0840 PP2C 2.6e-65 CL0238