Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0797 ATGGAGAAGAAGTGTGGGTGCTGGGCTGTTCTGAAACGCGGCGTTAGAGGTGCGTGCAAACCCTCAGCTTCTAGAGACTCTGCTTGCACTATTCCTCGTACTAGTCTCGTTTATGATGCAGCGACTGAGACACGTTACCTTAATGCTAGTAATCGAGAGTTATGTCCTCCCAATGATGCTCAACTATCTTATGATAACACTGTACCCCCACCTGAGGAAAACAGGGCTCCTTGCCAGCTCCTTCAATTTTCTTTTCAGGAACTAAAATCTGCAACCGGAAATTTCAGGCCTGATAGCATTCTCGGGGAAGGTGGTTTCGGATTTGTGTTCAAGGGATGGATAGAAGAAAATGGGACAGCTCCGGCCAAACCAGGTTCAGGGGTTACAGTGGCTGTAAAAAGCTTGAAGCCAGATGGTCTTCAGGGCCATAGAGAATGGGTGGCTGAAGTTGACTTCCTTGGACAACTTCACCACCCTAACCTTGTGAAACTTATTGGTTACTGCATTGAAGATGATCAGCGGCTTCTTTTTCTTGAAATGAACAATATGGTTATGGTTAATCTGGTAAAGATTGCACTTGGTGCAGCTAAAGGGTTGGCCTTCCTACATAGTGGTCCAGAACCTGTCATTTATAGAGATTTTAAAACATCAAACATTTTGCTTGATTCGGAGTATAATGCAAAGCTTTCAGATTTTGGTCTAGCTAAAGCAGGGCCTCAAGGAGACAAGACACATGTTTCTACCAGAGTTGTTGGAACTTATGGTTATGCTGCTCCTGAATATGTCATGACAGGTAAGAAGATATCTGTAGGCATGGGCAAAAATGAAATGGTCCATAAGGATCTCAATGATCTTGCAATCTTATCTTACCACTCCCGTTCATCGTGTCAACAAGGGAGAAGAAAAAAGAAAGCAGTTGGAACTCCACATCCACAGCTTGCCTACACACAATCCAAGAACATCAAGGGTACTTCTCCCTTGAATTCCAGCAAACATGATCGATGA 1005 0.4398 MEKKCGCWAVLKRGVRGACKPSASRDSACTIPRTSLVYDAATETRYLNASNRELCPPNDAQLSYDNTVPPPEENRAPCQLLQFSFQELKSATGNFRPDSILGEGGFGFVFKGWIEENGTAPAKPGSGVTVAVKSLKPDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLFLEMNNMVMVNLVKIALGAAKGLAFLHSGPEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGKKISVGMGKNEMVHKDLNDLAILSYHSRSSCQQGRRKKKAVGTPHPQLAYTQSKNIKGTSPLNSSKHDR 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0797 334 Gene3D Transferase(Phosphotransferase) domain 1 177 272 - -
Lele19g0797 334 ProSiteProfiles Protein kinase domain profile. 95 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele19g0797 334 MobiDBLite consensus disorder prediction 293 334 - -
Lele19g0797 334 Pfam Protein kinase domain 98 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele19g0797 334 ProSitePatterns Serine/Threonine protein kinases active-site signature. 209 221 IPR008271 GO:0004672|GO:0006468
Lele19g0797 334 ProSitePatterns Protein kinases ATP-binding region signature. 101 133 IPR017441 GO:0005524
Lele19g0797 334 PANTHER OS01G0588500 PROTEIN-RELATED 78 266 - -
Lele19g0797 334 SUPERFAMILY Protein kinase-like (PK-like) 67 265 IPR011009 -
Lele19g0797 334 MobiDBLite consensus disorder prediction 311 327 - -
Lele19g0797 334 FunFam Serine/threonine-protein kinase BIK1 65 180 - -
Lele19g0797 334 Gene3D Phosphorylase Kinase; domain 1 72 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0797 Lele-ChrLele19 4747145 4750418 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0797 83 266 Glycoside Hydrolase AT3G07070 52.475 5.58e-60 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele19g0797 Pkinase 1.9e-25 CL0016