Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0795 ATGGATCCAAGGCCCCAACGGAGGTCAATTCTTTATGGCCTCGGTCTTAAATTGGTTTCCTTACACCAAGGAACTGCGTTAGAGTTGCAAAGACCGAGAACCGAAAAGGCAAAAAGAATTTCACTTTCTTTCTCACAGCTTCAGAAAATTCTAAGTAACCTCATGGAAAGCAAAGGACTGGCACTGAAGCCACATCCCAAAAAGAATCTATGGAAGCCTGAGGAAGATTTGGTTCTGAAAACGTACATTGAAGCTCACGGTGAAGGAAACTGGGAAACAGTTTCCAAAAATTCAGGTCTAAACAGAGGAGGCAAGAGTTGCAGGCTAAGATGGAAGAACTATTTGAGACCTGACATTAAACGCGGAGAAATGTCTGAAGAAGAAGAAGACCTTATCATCAGACTGCATAAGCTTCTTGGCAACAGATGGTCACTAATAGCTGGAAGAATTCCTGGTAGAACCGATAACGAAGTGAAGAACTACTGGAATACCCATTTGAACAAGAGATGCCCTAGAGGCAAAAGGAAAGCCATCGATTCAAACAACAATCACCAAGAAACCAGCAAGAAATCAAGAATCGGCAACTCCGACTTACCGATTTCCGCAAGTATCGCTGAGACAGGGTTGTTGGATGCGAGGAAAGAAGAGAACTGTAACATCACAAACTCTTGGATCGACGAAATGCAGAGCTTCAACTGTGACCTAGATTTTCCGATTGTGCCGGGGAACAATGCGGTATTTGATTTCGAGGATGAGGCTGCTTTCATGACGAATTTGGATTCCGTTTTGCTGTTTGAAACTGAAGCTTTAGACTATAGATGGTTGGAGTCCAATTCGCACAAGCAATGCTTCATGCTGTAA 861 0.4321 MDPRPQRRSILYGLGLKLVSLHQGTALELQRPRTEKAKRISLSFSQLQKILSNLMESKGLALKPHPKKNLWKPEEDLVLKTYIEAHGEGNWETVSKNSGLNRGGKSCRLRWKNYLRPDIKRGEMSEEEEDLIIRLHKLLGNRWSLIAGRIPGRTDNEVKNYWNTHLNKRCPRGKRKAIDSNNNHQETSKKSRIGNSDLPISASIAETGLLDARKEENCNITNSWIDEMQSFNCDLDFPIVPGNNAVFDFEDEAAFMTNLDSVLLFETEALDYRWLESNSHKQCFML 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0795 286 SMART sant 120 168 IPR001005 -
Lele19g0795 286 SMART sant 67 117 IPR001005 -
Lele19g0795 286 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 115 IPR017930 -
Lele19g0795 286 MobiDBLite consensus disorder prediction 173 195 - -
Lele19g0795 286 ProSiteProfiles Myb-like domain profile. 116 166 IPR001005 -
Lele19g0795 286 SUPERFAMILY Homeodomain-like 67 162 IPR009057 -
Lele19g0795 286 CDD SANT 123 166 IPR001005 -
Lele19g0795 286 Gene3D - 68 120 - -
Lele19g0795 286 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 63 192 - -
Lele19g0795 286 FunFam Transcription factor TT2 124 193 - -
Lele19g0795 286 CDD SANT 71 115 IPR001005 -
Lele19g0795 286 FunFam MYB-related transcription factor 67 120 - -
Lele19g0795 286 Gene3D - 123 195 - -
Lele19g0795 286 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 116 170 IPR017930 -
Lele19g0795 286 Pfam Myb-like DNA-binding domain 69 115 IPR001005 -
Lele19g0795 286 Pfam Myb-like DNA-binding domain 121 166 IPR001005 -
Lele19g0795 286 ProSiteProfiles Myb-like domain profile. 63 115 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0795 Lele-ChrLele19 4723134 4727368 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0795 55 248 MYB Transcription Factor Family AT5G52600 51.244 2.29e-64 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele19g0795 Myb_DNA-binding 1e-11 CL0123