Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0784 ATGTCGAGCTGCAGCATCGATGTTGCCCCTGAGCAACTCTGCTACATCCCTTGCAACTTTTGCAACATTGTTCTTGCGGTGAGTGTTCCATGCAGTAGCTTATTTGACATAGTGACCGTCCGATGTGGACACTGCAGCAATCTATGGTCAGTGAACATGGCTGCTGCGTTTCAGTCACTGTCATGGCAAGATGTTCAGGCGTCTGGTGTATACAACAATCCGGAGTACAGAATTGACACATCAGGTTCCTCTTCCAAATGCAACAATAATATGATTGCAATGCGTGCACCCGCCAACCATGTCACTAAGGAAAGAATTGTCAACCGCCCTCCCGAGAAGAGGCAGCGCGTACCTTCTGCATATAATCAGTTCATAAAGGAAGAGATTCAGAGGATCAAGGCTAATAATCCAGATATCAGTCACAGGGAAGCTTTCAGTACAGCTGCCAAGAACTGGGCACACTTCCCTCATATTCATTTTGGGCTGATGTTGGAGACTAATAATCATCAAGCTAAGATGGAGAATGGGACGTCTGAGAAGCATTTAATGACGAAGTCAGCATTTTTGAACAAATGA 576 0.4549 MSSCSIDVAPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCSNLWSVNMAAAFQSLSWQDVQASGVYNNPEYRIDTSGSSSKCNNNMIAMRAPANHVTKERIVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLETNNHQAKMENGTSEKHLMTKSAFLNK 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0784 191 Gene3D High mobility group box domain 99 157 IPR036910 -
Lele19g0784 191 Pfam YABBY protein 9 162 IPR006780 GO:0007275
Lele19g0784 191 FunFam axial regulator YABBY 5-like 100 158 - -
Lele19g0784 191 PANTHER PROTEIN YABBY 6-RELATED 1 173 IPR006780 GO:0007275
Lele19g0784 191 SUPERFAMILY HMG-box 105 155 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0784 Lele-ChrLele19 4627317 4631268 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0784 8 173 C2C2-YABBY Transcription Factor Family AT2G26580 75.904 3.73e-86 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Lele19g0784 YABBY 8e-70 CL0114