Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0755 ATGGGCAGCTCAGCCGGCGACGCCGTTGATGGCCGTACTCCTCCTGTGGACAAGGGCGTCGATTATGCTAATTACTTTTGCACCTATGCTTTTTTATACCACCAGAAGGATATGCTCTCCGATCGGGTTCGCATGGACTCTTACTTCAATGCTATTTTTCAGAACAAGCATCACTTCAGTTGCAAGACTGTTTTGGATGTGGGAACTGGAAGTGGCATTCTTGCGATATGGTCAGCACAGGCCGGAGCAAGGAAAGTATATGCAGTTGAAGCAACTAAGATGGCAGAACATGCTCGTAATCTTGTCAAAGCAAATAATCTTCAACATGTGGTCGAAGTAATTGAGGGCTCAATGGAAGATATAACTTTGCCAGAGAAAGTTGACGTGATAATATCTGAGTGGATGGGATATTTTCTTCTGCGTGAATCTATGTTTGATTCAGTAATATGTGCTCGTGACCACTGGCTCAAACCAACAGGTGTTATGTATCCTAGTCATGCTCGCATGTGGATGGCACCCATTAGGACTGGGATTGTAGATCACAAAATGGGTGAGTACCATTCAACTATGGATGATTGGCACAACTTTGTTGATGAAACAAATACATATTATGGCGTTGATATGAGTGCTCTAACAAAGCCTTTTTCTGAGGAGCAGAGGAAATACTATCTACAGACATCAATGTGGAACAAACTTCAACCAAACCAAGTTATAGGGACAGCTTCTGTAATAAAGGAGATTGATTGTTTAACAGCTACTGTGGCTGATATAAAGGAAGTCAGATCAAAATTTTCTTCGTTAATAACCACAGAAAACACAAAGCTTTGTGGGTTTGGAGGGTGGTTTGATGTTCATTTTCGGGGAAGAGTTGAAGATCCAGCTGAACAGGAGATTGAGTTAACAACAGCTCCTAGTTTAGATAACGGCACTCACTGGGGTCAACAGGTGTTCCTATTGCATCCTACTCTCCATGTCACTGAAGGCGATCATTTAAGCATTTCTTTCTTCATGGATCGCTCAAAGGAAAACCATCGATTGATGGAGGTTGAGTTTGAGTGTGATGTTCAACAGCATTCTGGCAAGCATCTTAAATCTTTCAAAAGTGCGGATCCACATGATCGCCTTGAGCCTGACATTCAAAAGAGAAGAAAGGATAATCTCCACTGCTTGGGAACAAGATTGAAATTTGGCAGCAACATATTAGCAAGTATGAGATTCAAGAAAGGGACTAAGGTAGAAGTGTTATGCAAAACAGAGGTGCCTTCTGGCTCCTGGCGATGTGCAGAGATTATCTGTGGCAACGGTCGCGATTTCTCCATTAGATATGATGGGTATGATGATGGTACTAGTGGTGAGGCAATTGTAGTGAGGGTGCCCAGGAAAGCCATAAGACCATGTCCTCCTTTGATTGAAGTTACTGAGGATTGGAAGCCAGGTGATGTGGTAGAGGTTTCTCAAAAATTTTCCTGGTCAATGGCCGCGGTTTTGAAGGTTTTCAGGGAAAAGCACGTTTTGGTCAGGCTGCTTGGATCTTCTTTTGAATTTATGGTGAACAAAATTGACATCCGGGTCAGACAGTCTTGGCAGGATGAAGAATGGATTGTGATCGGAAAGGGTAGTTCCCACTGTGAGAATAGAAAATGTTACAAGAAACTTGCTCCAAGGCTTAGTTCATTGTTCAGTGCCCAAGCTCAGAAAACAACCGCAACTACCAAACAAGCTTTTGACCATCATGACTATCTTAATGACAAGAAAAAAGTGAATTATCAGAATCCCCACCTTAGTTCTTCTAAAACATTGAAGCGAAGGAGCCATCCACATGTGGAGCTATATCCTGAACCTCTCCAGATTAGGGCAACTTCAGACGAATTTTCTAGAACTGATAAAAAGAGGAGGAAGCACATTGACACTATTGGTTTCTCATTTGCAAATAACTTCGAGACAAATGATGATAGTGTCTCAAGTTCTATTGGTAGCTGTAGTGATGATGCTCAAGCTGCAGCCTTTCTTCTAGCCGTTTACAACTGTAAGAAGCAAGTTGAAGATAGACATGTTTCTTTGCATCGAATGAAGCTGTAG 2079 0.4223 MGSSAGDAVDGRTPPVDKGVDYANYFCTYAFLYHQKDMLSDRVRMDSYFNAIFQNKHHFSCKTVLDVGTGSGILAIWSAQAGARKVYAVEATKMAEHARNLVKANNLQHVVEVIEGSMEDITLPEKVDVIISEWMGYFLLRESMFDSVICARDHWLKPTGVMYPSHARMWMAPIRTGIVDHKMGEYHSTMDDWHNFVDETNTYYGVDMSALTKPFSEEQRKYYLQTSMWNKLQPNQVIGTASVIKEIDCLTATVADIKEVRSKFSSLITTENTKLCGFGGWFDVHFRGRVEDPAEQEIELTTAPSLDNGTHWGQQVFLLHPTLHVTEGDHLSISFFMDRSKENHRLMEVEFECDVQQHSGKHLKSFKSADPHDRLEPDIQKRRKDNLHCLGTRLKFGSNILASMRFKKGTKVEVLCKTEVPSGSWRCAEIICGNGRDFSIRYDGYDDGTSGEAIVVRVPRKAIRPCPPLIEVTEDWKPGDVVEVSQKFSWSMAAVLKVFREKHVLVRLLGSSFEFMVNKIDIRVRQSWQDEEWIVIGKGSSHCENRKCYKKLAPRLSSLFSAQAQKTTATTKQAFDHHDYLNDKKKVNYQNPHLSSSKTLKRRSHPHVELYPEPLQIRATSDEFSRTDKKRRKHIDTIGFSFANNFETNDDSVSSSIGSCSDDAQAAAFLLAVYNCKKQVEDRHVSLHRMKL 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0755 692 Gene3D Vaccinia Virus protein VP39 20 164 IPR029063 -
Lele19g0755 692 Pfam Ribosomal protein L11 methyltransferase (PrmA) 62 133 - -
Lele19g0755 692 FunFam Protein arginine N-methyltransferase PRMT10 166 370 - -
Lele19g0755 692 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 19 350 IPR025799 GO:0016274|GO:0018216
Lele19g0755 692 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 29 357 IPR029063 -
Lele19g0755 692 FunFam Protein arginine N-methyltransferase PRMT10 19 164 - -
Lele19g0755 692 SMART agenet_At_2 474 530 IPR014002 -
Lele19g0755 692 SMART agenet_At_2 404 471 IPR014002 -
Lele19g0755 692 Pfam Agenet domain 409 468 IPR008395 -
Lele19g0755 692 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 22 358 IPR025799 GO:0016274|GO:0018216
Lele19g0755 692 CDD AdoMet_MTases 63 163 - -
Lele19g0755 692 Gene3D - 166 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0755 Lele-ChrLele19 4440646 4448205 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0755 24 332 C2H2 Transcription Factor Family AT3G12270 32.326 1.14e-37 147
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g0810 17 19564961 19567804 Lele19g0755 19 4440646 4448205 hybridization
Lele18g0714 18 4367153 4369995 Lele19g0755 19 4440646 4448205 hybridization