Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0738 ATGAACAGAGCTGTGTTTGCCCCCATGGCGGACTTCTTTTACCCTTGGCGTTTGATGATTGTCTTCTCCGTCTCGCTTCTGCTTCTGAGTGTGCGAGTCAGTACGGAGCCGACTCAGGACAAGCAAGCCCTCCTTGCCTTCATCTCTCGGACCCCACACGCCAATCGCGTCCAATGGAACGCTTCCGACTCTGCCTGCAACTGGGTTGGGGTCGAATGTGATGCTTCTCGTTCCTTCGTCTTTGCTCTTCGTCTTCCCGGCGTTGGCCTTTTGGGCGGGATTCCTCCCAACACTATCGGTCGTCTCTCTCAGCTACGGGTTCTCAGTCTCCACTCCAATGGTCTCGCCGGTGAGATCCCTGCCGATTTCTCTAATTTGACGTTGCTTCGTAACTTGTACCTCCAGGATAACCAGTTCTCCGGTGGGTTTCCTTCGTCTCTGACTCAGGTGGGTCGTTTGACCCGCTTGGATCTCTCGTCCAACAATTTTACGGGTCCAATCCCTTTCTCAATCAACAATTTGACCCACTTGACTGGTCTATTCTTGCAAAGCAATGGATTCTCGGGCAATCTACCGAGCGTGAGTGCCAAATTGTCAGCCTTCAATGTTTCTAATAATCAGCTTAATGGTTCGATCCCCAAATCTCTCTCGAATTTCCCAGCATCCTCATTCGCCGGAAACTTAGATCTCTGCGGTGGACCATTGCCGCCATGTACCCCATTCTTCCCATCCCCGGTTCCGTCACCTTCCGCCCCCGTCGTGCCCTCTTCCCCAGCTCGCAAAAAGTCCAAGAAGCTCTCAAAAGGCGCCATCATCGGAATTGCAGTTGGGTGTTCTCTGGCGGCCTTGTTACTCCTCCTGCTTCTGCTTCTCCTCTGCCTGGGCAAACGCCGGCGAAGCCAGCCAGCGAAGCCGCCGAAGCCAGTGGTGGCGACGCGTGCTGCGCCGGCGGAGGCCGGAACATCGTCTTCAAAAGACGATATCACCGGTGGGTCCGTGGAGGCAGAGAGGAACAAGTTGGTGTTCTTCGAAGGAGGGATATACAGCTTCGATTTGGAAGATCTGTTGAGAGCTTCAGCAGAAGTTCTGGGCAAGGGAAGCGTCGGAACATCGTACAAGGCGGTGCTGGAAGAAGGAACTACAGTGGTGGTGAAGAGATTAAAAGACGTCGCCGTAACAAAGAAAGACTTTGATGCTCAAATGGAGGTTCTGGGCAAGATTAAGCACGAGAATGTGGTTCCTCTCAGAGCTTACTATTACTCCAAAGATGAGAAATTACTCGTCTACGATTACCTCCCTTCTGGTAGCTTGGCTGCTCTGCTTCACGGGAGTAGAGGCTCAGGGAGGACGCCGCTTGACTGGGATAGCCGAATGAGAATAGCGCTAGGTGCCGCCAGGGGGTTGCTTCACCTACACGTGTCAGGAAAAGTGGTCCACGGCAACATAAAAGCCTCCAACGTGCTCCTTCGAGGAAACGACAATGAGGCCTGCGTTTCGGACTTCGGCCTTAACCCGTTGTTCGCCAACACCACCCCATCCAACCGTGTGGCGGGATATCGGGCACCCGAAGTCCTCGAAACAAGGAAAGTCACTTTCAAATCCGACGTGTACGGCCTCGGAGTTTTGCTGCTGGAGCTCCTCACCGGCAAGGCGCCGAACCAGGCGTCGTTGGGCGAGGAGGGGATTGACCTCCCGAGATGGGTTCAGTCGGTGGTCCGAGAAGAATGGACGGCGGAGGTGTTCGACGCGGAGCTCATGAGGTACCATAATATAGAGGAAGAGATGGTTCAGCTGTTGCAGATAGCCATGGCGTGCGTGTCGGTGGTCCCCGATCAGAGACCCACCATGCAGGAGGTAGTACGGATGATGGAGGAGATCAACAGGAGCGAGACGGACGAGGGGTTGCGGCAGTCGTCGGACGATCCATCCAGGGGATCGGAAGGTCAAACGCCGCCGGCCGAATCAAGAACTCCGCCGAGAGCAATCACGCCTTGA 1995 0.5484 MNRAVFAPMADFFYPWRLMIVFSVSLLLLSVRVSTEPTQDKQALLAFISRTPHANRVQWNASDSACNWVGVECDASRSFVFALRLPGVGLLGGIPPNTIGRLSQLRVLSLHSNGLAGEIPADFSNLTLLRNLYLQDNQFSGGFPSSLTQVGRLTRLDLSSNNFTGPIPFSINNLTHLTGLFLQSNGFSGNLPSVSAKLSAFNVSNNQLNGSIPKSLSNFPASSFAGNLDLCGGPLPPCTPFFPSPVPSPSAPVVPSSPARKKSKKLSKGAIIGIAVGCSLAALLLLLLLLLLCLGKRRRSQPAKPPKPVVATRAAPAEAGTSSSKDDITGGSVEAERNKLVFFEGGIYSFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKDVAVTKKDFDAQMEVLGKIKHENVVPLRAYYYSKDEKLLVYDYLPSGSLAALLHGSRGSGRTPLDWDSRMRIALGAARGLLHLHVSGKVVHGNIKASNVLLRGNDNEACVSDFGLNPLFANTTPSNRVAGYRAPEVLETRKVTFKSDVYGLGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDAELMRYHNIEEEMVQLLQIAMACVSVVPDQRPTMQEVVRMMEEINRSETDEGLRQSSDDPSRGSEGQTPPAESRTPPRAITP 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0738 664 Gene3D Ribonuclease Inhibitor 37 196 IPR032675 -
Lele19g0738 664 Gene3D Transferase(Phosphotransferase) domain 1 432 645 - -
Lele19g0738 664 SUPERFAMILY Protein kinase-like (PK-like) 361 624 IPR011009 -
Lele19g0738 664 SUPERFAMILY L domain-like 47 219 - -
Lele19g0738 664 MobiDBLite consensus disorder prediction 625 664 - -
Lele19g0738 664 Gene3D Ribonuclease Inhibitor 198 238 IPR032675 -
Lele19g0738 664 FunFam pollen receptor-like kinase 1 327 431 - -
Lele19g0738 664 MobiDBLite consensus disorder prediction 625 640 - -
Lele19g0738 664 Pfam Protein kinase domain 360 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele19g0738 664 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 432 637 - -
Lele19g0738 664 Pfam Leucine rich repeat N-terminal domain 38 74 IPR013210 -
Lele19g0738 664 ProSiteProfiles Protein kinase domain profile. 357 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele19g0738 664 MobiDBLite consensus disorder prediction 299 330 - -
Lele19g0738 664 PANTHER OS05G0588300 PROTEIN 20 636 - -
Lele19g0738 664 FunFam Probable inactive receptor kinase RLK902 37 195 - -
Lele19g0738 664 Gene3D Phosphorylase Kinase; domain 1 325 431 - -
Lele19g0738 664 Pfam Leucine rich repeat 91 139 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0738 Lele-ChrLele19 4328595 4331267 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0738 40 644 Receptor kinase-like Gene Family AT5G58300 55.465 0.0 634
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele19g0738 Pkinase 1.3e-37 CL0016