Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0706 ATGGCACCACAAGATACTGCTTCTGTTGTTGAAATACCCCAGAGAACTCCTGGTCTACTGCGGGATCAGGTTCAGCTAGTCAAAAGAAAGGACTCTGATCGCTATGAAATTGTCTCAATCCCAGATTCTCTATCATTTGAGAAAGGTTTCTTCATAGTTATTCGTGCATGCCAATTGCTGGCTCAAAAGAATGATGGGATAATATTAGTTGGAGTTGCTGGACCGTCTGGAGCTGGGAAGACAGTTTTCACCGAGAAGGTCCTCAGCTTTATGCCAAGCGTTGCTGTCATAACAATGGACAACTATAATGATTCTAGTCGAGTCATAGATGGCAATTTTGATGACCCTCGGCTGACAGATTATGATACATTGCTAGAAAATATAAAGGGTCTCAAAGCTGGCAAGCCAGTTCAGGTGCCAATATATGATTTCAAGTCTAGCTCTCGCATAGGCTACAGGACTATTGAAGTCCCTAGCTCCCGTATCGTTATCATAGAAGGCATCTATGCCTTGAGTGAAAAATTACGTCCTTTGCTAGATCTTCGGGTGTCTGTCACTGGAGGAGTACACTTTGACCTTGTCAAGCGGGTTTTGCGGGACATTCAACGTGCTGGTCAAGAGCCTGAAGAAATAATTCAACAAATTTCTGAAACGGTATACCCGATGTATAAAGCCTTTATTGAGCCAGATCTCCAAACAGCACATATAAAAATCATAAACAAGTTTAACCCATTCTCTGGATTCCAGAATCCCACCTACATATTGAAGTCAACAAAGGCTGTGACGGAGGATCAAATCAAAGCGGTTATTGCTGCCGAGCATACTGAAACCACAGAGGAAACATATGACATATATCTTCTACCACCTGGGGAAGATCCTGAAGCGTGTCAATCATACTTGAGGATGAGAAACCGGGATGGAAAGTACAATCTTATGTTTGAGGAATGGGTTTCAGATAGTCCGTTCATTATATCTCCTAGAATTACTTTTGAGGTTAGCGTACGCCTTCTGGGAGGGTTGATGGCCTTGGGGTACACAATTGCAGCTATCCTGAAAAGAAACAGCCATATCTTTCATGATGATAAAGTATCCGTAAAAACCGATTGGTTGGAACAACTTAATCGCCTATATGTTCAGGTGCAAGGAAGAGATAGAAACTATGTTAAATCTGTGGCACAGAAACTGGAGCTGGATGGTTCATATGTTCCTCGAACCTACATTGAACAAATTCAGCTGGAGAAGCTTATAAATGATGTGATGGCATTGCCAGATGATCTGAAGACCAAACTCAGTATAGACGATGATGTGGTTTTGAGCCCCAAAGAAGCCCTTTCCAGAGCTTCTGCAGATAGGAGAATGAAGCACCTAAATCGCAATCTCTCACACTCATTTTCTAGTCAAAGAGACAAGAGTCTATCTAAGTTGACTAGATTAGCTATAAATAACAGAAGATTTGATGGACGTGCTCTAGAATCACCTGCAGCAATTGCAAATCAAGGAGTCATCACACAACTTTCCGATCAAATTTCTACATTAAATGAGAGAATGGATGAGTTCACATCCCGTATTGAAGAGCTGAATTCTAAGTTTGCTACCAGAAAAGTTTCCGCCAGTCAGCAGAACTTGGCTTTACAGGCTGAAGCTTGCAATGGTTCGGGACCCACTTCCCACTTCCTTACTGGGTTGGGTAATGGTTCATTGACTGGATCGCTGTTGCCTAATTCTTCATCATCTTCCCAACTGGCGAGGGAGTCCCCACTGATGGAAGAGGTTGTACTTATTGCACGGGGACAACGTCAAATCATGCATCATCTAGATGGCCTGAGCAATCTTTTGCATGAATACTTTGGAGAGAGAGCACGTCTGGGAAGAGCAAACCAAACGAGCAGGATGCTGCCCGATGTTGACTTCACCATCCCGCTTGTTCTGACTTTGGCATTTGGTGCTGTTGGCGTGTTTTTGTTCAAGGGTGTGACATCCCATAAATAA 1989 0.4304 MAPQDTASVVEIPQRTPGLLRDQVQLVKRKDSDRYEIVSIPDSLSFEKGFFIVIRACQLLAQKNDGIILVGVAGPSGAGKTVFTEKVLSFMPSVAVITMDNYNDSSRVIDGNFDDPRLTDYDTLLENIKGLKAGKPVQVPIYDFKSSSRIGYRTIEVPSSRIVIIEGIYALSEKLRPLLDLRVSVTGGVHFDLVKRVLRDIQRAGQEPEEIIQQISETVYPMYKAFIEPDLQTAHIKIINKFNPFSGFQNPTYILKSTKAVTEDQIKAVIAAEHTETTEETYDIYLLPPGEDPEACQSYLRMRNRDGKYNLMFEEWVSDSPFIISPRITFEVSVRLLGGLMALGYTIAAILKRNSHIFHDDKVSVKTDWLEQLNRLYVQVQGRDRNYVKSVAQKLELDGSYVPRTYIEQIQLEKLINDVMALPDDLKTKLSIDDDVVLSPKEALSRASADRRMKHLNRNLSHSFSSQRDKSLSKLTRLAINNRRFDGRALESPAAIANQGVITQLSDQISTLNERMDEFTSRIEELNSKFATRKVSASQQNLALQAEACNGSGPTSHFLTGLGNGSLTGSLLPNSSSSSQLARESPLMEEVVLIARGQRQIMHHLDGLSNLLHEYFGERARLGRANQTSRMLPDVDFTIPLVLTLAFGAVGVFLFKGVTSHK 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0706 662 CDD UMPK_like 69 241 - -
Lele19g0706 662 Gene3D - 255 415 - -
Lele19g0706 662 Coils Coil 502 529 - -
Lele19g0706 662 ProSiteProfiles CYTH domain profile. 250 412 IPR023577 -
Lele19g0706 662 PRINTS Uridine kinase signature 226 239 - -
Lele19g0706 662 PRINTS Uridine kinase signature 67 84 - -
Lele19g0706 662 PRINTS Uridine kinase signature 134 149 - -
Lele19g0706 662 PRINTS Uridine kinase signature 190 200 - -
Lele19g0706 662 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 238 IPR027417 -
Lele19g0706 662 Pfam CYTH domain 273 406 IPR023577 -
Lele19g0706 662 PANTHER URIDINE KINASE 18 425 - -
Lele19g0706 662 Pfam Phosphoribulokinase / Uridine kinase family 70 238 IPR006083 GO:0005524|GO:0016301
Lele19g0706 662 Gene3D - 68 248 IPR027417 -
Lele19g0706 662 SUPERFAMILY CYTH-like phosphatases 263 409 IPR033469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0706 Lele-ChrLele19 4097080 4101931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0706 68 238 PRT Gene Family AT5G40870 28.333 1.89e-18 87.0