Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0700 ATGGAGGGCCATGAAGCTGAGAAACTCTATGCAGTACCTAGTTCAAGCTCAACTCAGAATCCCCAATTTGCTTCTGCAACAGAGAAACCCATCTTGAACATGGAAACAGGGGAAGAGTATCATGTCTTGGCTCATTTGGATCCATTTCAAAGCTCACATTACATTCCATTTTACTACTCACAAGTTCATCACCTTCCTAATAAATCCTCTTCAAACGCATCTCTTTACAGTAACAACAACGAAGAAAAAGCTATTATTGCTGATGACCAGAAGAGAAGAAGAATGATTTCTAACAGAGAATCAGCGCGCAAATCGCGAATACGGAAGAAGCAACAAATTGAAGCTCTTCAGTGTCGTGTTAATGATCTGCAAGCTATGAATGATCAACTCTCACGGAAGATCATCAGCTTACTGGAATGTAACCAGCAAATTCTGCAACAGAATGTTCAGCTTAAAGAGAAGGTTTCATCTCTGCAAGAAGCCCTCTCAGAAATGACGATGGTGTTTGTATGTCAAGATATCTCACCAGAGCAGTTGTGA 540 0.4074 MEGHEAEKLYAVPSSSSTQNPQFASATEKPILNMETGEEYHVLAHLDPFQSSHYIPFYYSQVHHLPNKSSSNASLYSNNNEEKAIIADDQKRRRMISNRESARKSRIRKKQQIEALQCRVNDLQAMNDQLSRKIISLLECNQQILQQNVQLKEKVSSLQEALSEMTMVFVCQDISPEQL 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0700 179 MobiDBLite consensus disorder prediction 1 24 - -
Lele19g0700 179 Gene3D - 89 144 - -
Lele19g0700 179 Coils Coil 141 161 - -
Lele19g0700 179 SUPERFAMILY Leucine zipper domain 90 146 IPR046347 GO:0003700|GO:0006355
Lele19g0700 179 SMART brlzneu 86 150 IPR004827 GO:0003700|GO:0006355
Lele19g0700 179 Pfam bZIP transcription factor 89 148 IPR004827 GO:0003700|GO:0006355
Lele19g0700 179 FunFam BZIP transcription factor 88 139 - -
Lele19g0700 179 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 88 137 IPR004827 GO:0003700|GO:0006355
Lele19g0700 179 CDD bZIP_plant_GBF1 91 139 IPR045314 GO:0003700|GO:0006355
Lele19g0700 179 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 29 167 IPR044521 -
Lele19g0700 179 Coils Coil 106 133 - -
Lele19g0700 179 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 93 108 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0700 Lele-ChrLele19 4060758 4061553 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0700 83 167 bZIP Transcription Factor Family AT5G60830 51.765 9.75e-23 88.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele19g0700 bZIP_1 3.7e-12 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g0865 17 19945966 19946490 Lele19g0700 19 4060758 4061553 hybridization