Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0696 ATGGAGCTCCCTCAAGCGCGTCCCTTTGGAACTGAAGCAAGGAAACCGACGCATGACTTTCTGTCACTGTATAGTCATTCAACTGCCCAACAAGATCCAAGGCCACCGTCACAAGGAAGTTACATGAAAACGCATGATTTCTTGCAGCCACTAGAACGTGTTGAGGGGAAAGCAAACGCGAAGGAAGAAGCATCGGATGAGATATCATCAGTGGTTCAAAAGCCACCACCTCCGGCACCGCCGCCGACACCATGTGTTGAGCACATCCTACCTGGAGGCGTTGGGACTTACAGTATCAGCCACATTTCGTATTTTAGTAATCCCAGGGTTCCAAAGCCGGAGGTTTCTTCCCTCTTCACTGTGTCTCCTTGTGAAGCAAGTACAGATAGAAATGAGGAGAACTCCAACTGTAGTTCTTATACTGGAAGTGGTTTCACTTTGTGGGAAGAGTCTGCCGTTAATAAGGGAAAGACAGGGAAGGAGAATGACGTGGGAGAGAAACCCGTTATAGCAGAGTGTGCAGCCAAGCCAGGGCAGTGGTCGTTGAGTGAGAGAGCATCTCAGTCATTTGTTAAGAATAATCAGAATAGCTTCAGTTCTATCACTTCCACTCAGAAAAGTGGGCAGAAGAACCAGAGTTTTATTGATATGATAAAATCCGCCAAGGATTGCTCTCAGGATGAGGAACTAGACAATGAAGAAGCATTCATTTTTAAGAAGGAATTCTCAACTACCCAGAGAGGCGAATTGAGAGTGAAAGTGGATGGGAAGAGTTCTGATCAAAGGCCAAATACACCACGATCAAAACACTCTGCAACAGAACAGCGTAGGAGGAGCAAAATTAATGACAGATTCCAGATGTTGAGAGAGCTTATTCCACATAGTGACCAGAAAAGAGACAAGGCATCTTTTCTGTTGGAGGTCATTGAGTACATTCAATTTTTACAAGAAAAGGTTCATAAACACGAAGGTTCATACCAAGCGTGGAATCAAGAGAAAGAAAAATTGACTCCATGGAGGAATAATCACAGGCCTTCAGAAAGCTATGATGATCAACCTCGTGTAATAAATAGTGGGTCAGGTCCTTCTTCAATATTACTGTTTCCTTCAAAGATGGAGGAGGAAAATTTTAGCATCTCCCCAACGATTACTAGGGGCACAAAGAACGTAGATGCCGGCACTAGTTCTGCAACTACATTGAAGGCAATGAATCAACATCCTGGAATAACCAATAAGGCCATGCCAGTTTCTAACCCTTCACAGCCAAAGTTTTTCAATCCGGGCCAAAGTGGCGGTCCAGGTAGATTGGTGTCTCAGCTCACACACAGGCTAACCTCAGATGCTGAAAATACCATATATAATCCCTTAGGACTATCTCAGACCCACACTTCTGCTACAGGGGTGACTGCTGCTAGTGATAAACTTAAAGAGAAAGAGCTCACCGTTGAAAGCGGTGCCATTAGCATATCAAGTGTGTACTCAAAAGGGTTGTTGGATTCACTAACACAAGCACTGAAGAATTCAGGAGTGGATTTGTCACAGGCTAGCATCTCAGTTCAAATTGAGCTTGGTAAGCAAGCAAACATCAGACCAGTTGGACCAACTTCTGGGGTTAAGGATGAAGTTACTTCTAGCAATCAAGGGATGAGGAAGCGCTCTAGAGTTTGTAGCGTCGAGGAGACTGACCTAGCAGTAAAGAAGCTAAAGACAAGCAGAAGTTGA 1722 0.4454 MELPQARPFGTEARKPTHDFLSLYSHSTAQQDPRPPSQGSYMKTHDFLQPLERVEGKANAKEEASDEISSVVQKPPPPAPPPTPCVEHILPGGVGTYSISHISYFSNPRVPKPEVSSLFTVSPCEASTDRNEENSNCSSYTGSGFTLWEESAVNKGKTGKENDVGEKPVIAECAAKPGQWSLSERASQSFVKNNQNSFSSITSTQKSGQKNQSFIDMIKSAKDCSQDEELDNEEAFIFKKEFSTTQRGELRVKVDGKSSDQRPNTPRSKHSATEQRRRSKINDRFQMLRELIPHSDQKRDKASFLLEVIEYIQFLQEKVHKHEGSYQAWNQEKEKLTPWRNNHRPSESYDDQPRVINSGSGPSSILLFPSKMEEENFSISPTITRGTKNVDAGTSSATTLKAMNQHPGITNKAMPVSNPSQPKFFNPGQSGGPGRLVSQLTHRLTSDAENTIYNPLGLSQTHTSATGVTAASDKLKEKELTVESGAISISSVYSKGLLDSLTQALKNSGVDLSQASISVQIELGKQANIRPVGPTSGVKDEVTSSNQGMRKRSRVCSVEETDLAVKKLKTSRS 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0696 573 Coils Coil 312 332 - -
Lele19g0696 573 SMART finulus 271 321 IPR011598 GO:0046983
Lele19g0696 573 MobiDBLite consensus disorder prediction 538 552 - -
Lele19g0696 573 MobiDBLite consensus disorder prediction 337 362 - -
Lele19g0696 573 CDD bHLH_AtBIM_like 264 340 - -
Lele19g0696 573 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 265 315 IPR011598 GO:0046983
Lele19g0696 573 MobiDBLite consensus disorder prediction 1 86 - -
Lele19g0696 573 FunFam BHLH domain class transcription factor 263 335 - -
Lele19g0696 573 MobiDBLite consensus disorder prediction 249 281 - -
Lele19g0696 573 MobiDBLite consensus disorder prediction 21 44 - -
Lele19g0696 573 Pfam Helix-loop-helix DNA-binding domain 267 316 IPR011598 GO:0046983
Lele19g0696 573 MobiDBLite consensus disorder prediction 48 68 - -
Lele19g0696 573 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 263 336 IPR036638 GO:0046983
Lele19g0696 573 Gene3D - 263 338 IPR036638 GO:0046983
Lele19g0696 573 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 12 571 IPR044295 GO:0003700|GO:0006351|GO:0046983
Lele19g0696 573 MobiDBLite consensus disorder prediction 530 555 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0696 Lele-ChrLele19 4040000 4044793 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0696 1 527 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G08130 49.177 1.04e-123 373
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele19g0696 HLH 2.7e-15 No_clan