Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0686 ATGGAGTCTTGGAGTTATGATTCTGAAGAAAAAGGGTTTGTGTCCAACGATACACTCTCACCTCCTAATTCACTTTCCAGAAGTAAAGGTTCCATCTTGGGATGGGAATTGAAAAGTCCCTCTGGAATTTCCAGCGACATGTTATCCTCGGCTCAACCAAACGTAGGAAATCAAGGTTTTGAGGAAATGGGTTTTCCAGAAATGTTGGGTAAACAATTGTCCAATGATCCAATTAGCACTGTGTCCAACAGAAGCCTCGAAGGTGGTTCTTTTATGGCTGCTGCCCCAATTGCAATTTCTGGAGTTGAAGACTCTAATTCGAAGCTTTCTAACTCCGTGGTTGAATCTAACGGTCGAGATTCACTCGTTGATTTGAAGCTGGGACGATTTGGAGATCCCAGAGATGCCATGGATTCAGCATTCCCCAGAGGAAACCCTATTTTGTCTTCCTCAGAATCATCGGTTCCGACCAAGAGAGTACGGGGTTCGGGGGCTCATTCACAAACCGCGTACTGTCAAGTTTATGGATGTAACAAAGATCTACGTGCCTCTAAAGACTACTACAAGAGGCACAAAGTTTGCGAGGTTCACTCCAAGACTTCCAAAGTTATAGTCAACGGCATCGAACAAAGATTTTGTCAGCAATGTAGCAGGTTTCACTTGCTGGCTGAATTTGATAGTGGTAAGCGCAGCTGTCGCAAACGCCTTGCAGGTCATAACGAGCGCCGGCGAAAGCCACAAGTTGGTATTCACCCTACAAAGGCTGGAAGATTGCTTCAACCGTACAGTGATAGTAGATTCCAGGGCACCATGCTAACGACCGCATCTTTTATCTGCCAAGAGATACTTCCTACCGGGACTTTGCGCTCTGATAGATATGGAACGAATGACTGTTGGAGACCTATAAAGAATGAAGATGGGACTGATTTTAGGCATCTTCCTGGTGTTCCTATGTCAAATGGACACCCTCAGTCAACATCTCTATTCCATCCATTTAACGAAAGGCAATTTCCTTTTCTTCATGAAAATGGTTTCGATCCGAGATGA 1047 0.447 MESWSYDSEEKGFVSNDTLSPPNSLSRSKGSILGWELKSPSGISSDMLSSAQPNVGNQGFEEMGFPEMLGKQLSNDPISTVSNRSLEGGSFMAAAPIAISGVEDSNSKLSNSVVESNGRDSLVDLKLGRFGDPRDAMDSAFPRGNPILSSSESSVPTKRVRGSGAHSQTAYCQVYGCNKDLRASKDYYKRHKVCEVHSKTSKVIVNGIEQRFCQQCSRFHLLAEFDSGKRSCRKRLAGHNERRRKPQVGIHPTKAGRLLQPYSDSRFQGTMLTTASFICQEILPTGTLRSDRYGTNDCWRPIKNEDGTDFRHLPGVPMSNGHPQSTSLFHPFNERQFPFLHENGFDPR 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0686 348 MobiDBLite consensus disorder prediction 1 30 - -
Lele19g0686 348 MobiDBLite consensus disorder prediction 144 162 - -
Lele19g0686 348 ProSiteProfiles Zinc finger SBP-type profile. 169 246 IPR004333 GO:0003677
Lele19g0686 348 Gene3D - 162 233 IPR036893 GO:0003677|GO:0005634
Lele19g0686 348 MobiDBLite consensus disorder prediction 138 162 - -
Lele19g0686 348 FunFam Squamosa promoter-binding-like protein 14 163 233 - -
Lele19g0686 348 SUPERFAMILY SBT domain 170 249 IPR036893 GO:0003677|GO:0005634
Lele19g0686 348 MobiDBLite consensus disorder prediction 8 30 - -
Lele19g0686 348 Pfam SBP domain 172 245 IPR004333 GO:0003677
Lele19g0686 348 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 41 265 IPR044817 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0686 Lele-ChrLele19 3974910 3977577 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0686 1 288 SBP-box Gene Family AT1G69170 38.542 6.74e-51 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lele19g0686 SBP 3.9e-31 No_clan