LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele19g0683	ATGAGACACGGAGCTCGATGCGCGTGGCTTAGAAAGACGTCAGCAGCATCGCCATCTTCAGTGGAATGGGCCAGTGAATGTGATCACATGCACGATGACTTTTGCCGGCTTATGTCTGTGAACCCAGAAATGGAGTCTCTGTGGTTATCATTCTCTGGATCCGTTTCCTCACGCAATGGCTGCCCAATCTTGCTCGTGTTGCTCCTCACTTGCTCCACATTTACTTCTTCTGAAGCCTATGATGCACTTGATCCAACTGGAAATATAACAATCAAATGGGATGTCATTAGCTGGACTCCAGATGGCTACGTTGCTGTTGTTTCGATGTACAACTTTCAACAGTACCGACATATTCAAGCTCCGGGATGGATATTAGGGTGGCGGTGGGCGAAAAAGGAAGTTATTTGGAACATGATGGGAAGCCAAACCACAGAGCAAGGAGACTGCTCAAGGTTCAAAGGGAACATCCCACATTGCTGTAAGAAGGATCCTACAGTGGTGGACTTGTTGCCGGGAACTCCTTACAATCAACAGATTGCAAATTGTTGCAGAGGAGGAGTACTAAATTCATGGGGTCAGGACCCTACCACGTCAGTAAGTTCATTTCAGGTAAGTGTAGGTTCCGCCGGAACATCTAACCGAACCATCAAATTGCCCAAAAATTTCACCCTCAAAGCACCAGGTCCAGGTTATACTTGTGGTCCTGCAAGGAAAGTGAAACCAACCAAATTTATTACTAATGACAAGAGAAGAACCACTCAAGCATTGATGACCTGGAATATTACCTGCACGTATTCTCAATTCCTGGCTCAAAAGACACCAACTTGTTGCGTGTCTCTCTCATCTTTCTATAATGAGACAATAGTAAAATGCCCGACTTGTGCCTGTGGCTGCCGAAACAGAACAGAACCTGGTAGCTGTGTGGATCCAGATCGTCCGATGTTAGCTTCGGTTCTACCGTCTCCTGGAAAAGCCATCAACATGCCTCCTCTGGTCCAGTGTACCAGCCATATGTGTCCAATTCGAGTGCATTGGCATGTGAAGGTCAACTATAAAGAGTACTGGAGAGTGAAAGTCACAATCACAAATTTCAATCACAGGATGAACTATACACAGTGGAACCTCGTTGTGCAGCATCCGAATTTCGATAACTTAACCCAAATTTTCAGCTTCAATTACAAGCCATTAACACCTTATGAGGGATTAAATGATACGGGCATGATGTGGGGAGTTAAATTCTACAACGATTTGCTTACTTCAGCTGGAGCACTTGGGAATGTGCAAAGTGAGCTCTTATTTCGAAAAGATAAGTTAACTTTCACATTTGATAAGGGATGGGCTTTCCCACGAAGGATTTATTTCAATGGGGATAATTGCGTCATGCCACCTCCAGATTCCTACCCATGGTTGCCAAATGCAAGTTCAAAACTTGTTTCATCTCTACTTTCTCCAATCTTAGCCATCATAGCTTCGTTGTTGATCTTATTGACTCGTGCATAA	1500	0.4447	MRHGARCAWLRKTSAASPSSVEWASECDHMHDDFCRLMSVNPEMESLWLSFSGSVSSRNGCPILLVLLLTCSTFTSSEAYDALDPTGNITIKWDVISWTPDGYVAVVSMYNFQQYRHIQAPGWILGWRWAKKEVIWNMMGSQTTEQGDCSRFKGNIPHCCKKDPTVVDLLPGTPYNQQIANCCRGGVLNSWGQDPTTSVSSFQVSVGSAGTSNRTIKLPKNFTLKAPGPGYTCGPARKVKPTKFITNDKRRTTQALMTWNITCTYSQFLAQKTPTCCVSLSSFYNETIVKCPTCACGCRNRTEPGSCVDPDRPMLASVLPSPGKAINMPPLVQCTSHMCPIRVHWHVKVNYKEYWRVKVTITNFNHRMNYTQWNLVVQHPNFDNLTQIFSFNYKPLTPYEGLNDTGMMWGVKFYNDLLTSAGALGNVQSELLFRKDKLTFTFDKGWAFPRRIYFNGDNCVMPPPDSYPWLPNASSKLVSSLLSPILAIIASLLILLTRA	499

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele19g0683	499	PIRSF	COBRA	54	499	IPR006918	GO:0010215\|GO:0016020
	Lele19g0683	499	Pfam	COBRA-like protein	103	266	IPR006918	GO:0010215\|GO:0016020
	Lele19g0683	499	PANTHER	PROTEIN COBRA	68	482	IPR006918	GO:0010215\|GO:0016020

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele19g0683	Lele-ChrLele19	3948014	3953335	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele19g0683	46	496	COBRA Gene Family	AT3G02210	73.673	0.0	721