Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0658 ATGGATGCCAAGGACATCCTTGGTTTGCCCAAAACTTCCTTACCAATTCAAGAGAAAAAGTCTCGGCCGCAAAAAGATTCACAGAGAAAACCAGATGGCATTTCACGGGAGGTATATGCACTCACTGGTGGTTTGGCACCTCTTATGCCTGCAATTGATTCGTCTCAGTTAAAGAAAAGGCCTCCATCTGACGAGAAGATCACTTGGCAGTGGCTTCCATTCACCAATTCTGCTCGCAAAGATAATCTTCAACTATACCATTGGGTCCGAGTTGTAAATGGTGTTCCACCAACTGGGGACTATTCTTTTGCCAAATATAACAAGTCTGTGGACATTATCAAATACACAGATGAGGAGTATGAGAAGTATCTGACAGATCCAATGTGGACCAAGGAAGAGACGGATCAACTGTTTGACTTGTGTGAGAGGTTTGATCTTCGGTTCATTGTGATAGCTGACAGGTTTCCTTCATCACGAACTGTAGAGGAATTGAAAGACCGATACTACAGTGTATCTCGGACTCTGTTAATTGCTAGGGCTCCATCTTCTGCGGAAGTTCCAATGCATCCTTTAGTTAAGGAACCATACAATGTTTCACAAGAGGTAGAGCGGAAACGAGCACTGTCCATGTACCTCTCTCAAACAAAGCAACAAGAGCGAAAAGATCAAGAGGTTCTTGCTGAAGCAAAAAGAATAACTGAATCACGCATGCCTGCAAAGGTTGCTGAAGAGTCTGAGGTTCCTGCTGCATCAAATGCTGGTGCGGAAGCTACAGAGAAGGCTATCTCTGGGGATCCTCTATCAAGTGTTCAGTTTCCATCAACAGTTGTTCCGTCCACATCAACAGCAGATAATGCATCCACTCTTGCTTCCCTTCGCATGCTTCGTGTGTATCTAAGAACATATGCACTTGATCAAATGGTCCAAGCTGCAAGCTCATCTGCTGGACTCCGGACCATCAAACGGGTGGAACAAACACTGCAAGAAGTTGGGGTTAATTTAAAACCAAGGGTTCCAACCAAAGCTGTTTGTGCAGAACATCTTGAATTAAGAAAAGAAATACTAACTCTGCTCAATCTTCAGAAACAGCTGCAGTATAAGGAGGCAGCAGGTCGTGATGGTTCATACACTGAAACACCTGGCACACCGAAGGATAGGACATTTATTCCAGATTCTATGAGTTTTGGAGGTGAGAGGGTCGGTAAAAGGGACCAGAAACGCAAGGCTCCTGGGAGGATATCAGAAGCTCCATCATCACCGGCTCAGTCTAAAAGGCCTAGAAAACTAAAGGCCTCTGATCTATAAATTCTGTCAACAAGAATGAGGAATGCAGGTGTAAACTCATGGCTCAGAAATTCAGAATTTCTAACTGAAGTTCTTTGTTTCCTTCTGGGTTGTTGCCGGTCTCAGTAA 1413 0.4416 MDAKDILGLPKTSLPIQEKKSRPQKDSQRKPDGISREVYALTGGLAPLMPAIDSSQLKKRPPSDEKITWQWLPFTNSARKDNLQLYHWVRVVNGVPPTGDYSFAKYNKSVDIIKYTDEEYEKYLTDPMWTKEETDQLFDLCERFDLRFIVIADRFPSSRTVEELKDRYYSVSRTLLIARAPSSAEVPMHPLVKEPYNVSQEVERKRALSMYLSQTKQQERKDQEVLAEAKRITESRMPAKVAEESEVPAASNAGAEATEKAISGDPLSSVQFPSTVVPSTSTADNASTLASLRMLRVYLRTYALDQMVQAASSSAGLRTIKRVEQTLQEVGVNLKPRVPTKAVCAEHLELRKEILTLLNLQKQLQYKEAAGRDGSYTETPGTPKDRTFIPDSMSFGGERVGKRDQKRKAPGRISEAPSSPAQSKRPRKLKASDLXILSTRMRNAGVNSWLRNSEFLTEVLCFLLGCCRSQ 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0658 470 MobiDBLite consensus disorder prediction 18 33 - -
Lele19g0658 470 FunFam DNA methyltransferase 1-associated protein 1 97 184 - -
Lele19g0658 470 SMART sant 125 174 IPR001005 -
Lele19g0658 470 CDD SANT_DMAP1_like 129 171 - -
Lele19g0658 470 Gene3D - 98 184 - -
Lele19g0658 470 MobiDBLite consensus disorder prediction 371 432 - -
Lele19g0658 470 SUPERFAMILY Homeodomain-like 125 176 IPR009057 -
Lele19g0658 470 Pfam SANT/Myb-like domain of DAMP1 101 175 IPR032563 -
Lele19g0658 470 PANTHER DNA METHYLTRANSFERASE 1-ASSOCIATED PROTEIN 1 FAMILY MEMBER 1 417 IPR027109 GO:0006281|GO:0006338|GO:0035267|GO:0043967|GO:0043968
Lele19g0658 470 MobiDBLite consensus disorder prediction 1 36 - -
Lele19g0658 470 MobiDBLite consensus disorder prediction 397 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0658 Lele-ChrLele19 3783520 3788460 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele19g0658 SANT_DAMP1_like 3.9e-31 CL0123