Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0641 ATGTCAGAGCATGTAACAGATTTCTGGGGCTTACTATTAATCTGTTCCTTAATCCTTTTCTCAGTGGGTAAAATAGTTGCCGGAGATTCTCTGGACACAGACAGAGAAGTTTTGCTTCAGCTAAAATTATACCTTAACAATCAAACTCTAGTAGACCAAGGACGATACACAAACTGGAACACGACAAGTTCAAATCCTTGTGAATGGTCGGGAATCTGGTGCAGCGGTGGCGGCGAAGTAACAACAACGACGAGGAGGGTGGTCGGAGTCGACCTCTCCGACAACAAAATCACCGGCGAGATATTCCAGAACTTCTCTCAGCTCACCCATCTCACACACCTCGACCTTTCCCGGAACACACTCTCCGGCAAGATTCCGGCGGACTTAAGGCGGTGCCAAAAGCTCGTGTATCTCAATCTCTCCTACAATATTCTTCCCGAAGAGTTGAATTTAATCGGCTTGACAAACTTACAAACTCTTGACTTATCAGGCAACAGGCTTCATGGCGATCTTGGGTTGAATTTCCCTGCCATTTGTGACAATCTGATACGTCTGAATATCTCAGGGAATAACTTCACCGGTAGGATTGATGAATGCTTCGATCAGTGTTCGAAATTGCAGTACTTGGATTTGAGCACTAATAAACTGAGTGGGAATATATGGATGGGAATTGCAAATCTGAGAATGTTTTCTGTTTCGGAGAATTTTATCAGCGGAAAAATTCCTCCATCAGCTTTTCCGGCTCAGTGCAATCTTCAAGTTCTAGACATTTCAGAAAACATGTTCACTGGGAATGTTCCTAAGGAGGTTGCTAACTGCAAGGATTTAACGATTCTGAATCTCTCTAGCAACAAGTTCAACGGATCAATACCTAAAGAAATTGGTTCAATTTCTGGGATTGAAGCACTGTACTTGGGGAACAACAGTTTCTCAAGAGATATCCCAGAAGAACTCTTGAACTTGACCAGTTTGGCGTTCTTGGATTTAACTAGAAATCAATTTGGTGGGGACATACAAGAGATATTTGGGAAATTCAAGCCGGTGAAGTATCTTCTATTACACTCAAATTCTTACACTGGAGGATTATCTTCATCAGGAATTCTCAGATTACCAAACGTTCTACGCTTAGACCTAAGCTACAACAATTTCTCAGGCCCATTACCCACAGAAATCTCTCAAATGTCAAGCCTCAAATTATTAATGTTAGCCTACAATCGATTCAATGGAATTATTCCATCTGAATTTGGAAACTTGCCTCATCTTCAAGCTCTTGACTTATCTTTCAACAACTTATCAGGGCCAATCCCTCCAAATCTTGGTAACTTAACCTCTCTTTTATGGCTCATGCTTGCGAATAATTCACTAACAGATGAAATCCCAATTGAGCTGGGGAACTGTTCGAGCTTATTATGGCTAAACCTTGCAAATAATAAACTCTCGGGAAAATTCCCACCTGAATTGGCCAATATAGGAAGAAGGGCCATGGTCACATTTGAATCAAATAGGCAATATGATACCGTTAGTGCTGGTTCTGGTGAGTGCTTGGCCATGAAGAGATGGATTCCTGCAGATTATCCTCCATTTAGTTTTGTTTATGATATTCTTACGAGGAATAATTGCAGAAGAATTTGGGACAGATTGCTTAAAGGGTATGGGATTTTCGCGGTTTGCAGTGCAGGTTCGTTTTCAACAATGTCTCAAATCTCTGGTTATGTTCAGCTAAGTGGGAATCAACTCTCAGGTGAAATTCCTCCAGAAATTGGAACGATGCAGAACTTGAGTTTGTTGCATTTAGGGCTTAATAAATTTTCTGGGAAACTACCTGTAGAGGTGAAAAATATGCCGCTTGTGGTGTTGAACATAACAAGAAACGAGTTTTCTGGGGAAATTCCTTCGGAAATTGGAACCATGAAGTGTTTAATGAACCTTGATCTCTCCTACAATAATTTTTCTGGGGTTTTTCCTTCAAGTTTGAGCAGCTTGACAGAGCTCAGCAAGTTCAACATTTCTTATAATCCCTTGATTTCAGGTGAGATTCCATCGTCAGGACAACTAGCGACGTTCGAGAAATACTCATATCTGGGGGATCCCCTGTTGGATCTGCCAAGTTTCATCGACAACTCCACCGATAATCACAAAAACACGACCTTGCGTAACAGAACCATACAAAAATCCACGAATCTCTCTGTTTTCATGGCGTTCTTTGCAATCATTCTGGCTTTCTTAGTATTCGGTCTTCTTACTGTCATAATCTGTTTGCTGATAAAAACCCCGTCGGAAGAACCACTCCTGAGAGACATAAAACTCGACCATGAGTCTGGAACCTCGTCCCCATGGTTGTCGGACACAGTTAAGGTTATTCGATTGGACAGGACAGCTTTTACACACACTGACATCTTGAAAGCAACCGGAAACTTCTCAGACCACAGAATTATAGGCAAAGGAGGCTTCGGAACAGTGTACAGAGGAATATTTTCAGACGGAAGAGAAGTGGCAGTGAAAAAACTGCAAAGAGAAGGACTTGAAGGCGAAAAAGAATTCAGAGCAGAAATGGAAGTTCTAAGCGGCCATGGCTTGGGTTGGCCCCACCCAAACCTCGTCACACTCTATGGTTGGTGCCTCGACGGTTCAGAAAAAATACTGGTTTACGAATACATTTCCGGTGGAAGCTTGGAGGATCTCGTAACCGACAGATTAAAATTCAGTTGGAGACGACGGCTAGAAGTAGCCATTGACGTTGCTCGAGCTTTGGTTTACTTGCACCATGAATGCTACCCTTCAATCGTTCACAGAGATGTGAAGGCAAGCAATGTGTTGTTGGACAGCAAAACAGGGAAGGCCAAAGTTACAGACTTTGGACTAGCTAGAGTGGTTGACGTCGGAGACAGCCACGTCAGTACGATGGTGGCAGGGACGGTGGGGTACGTGGCGCCGGAGTACGGCCACACATGGAAGGCGACGACGAAAGGGGACGTGTACAGTTATGGTGTGTTGGCTATGGAGTTGGCGACTGGAAGAAGAGCATTGGACGGAGGGGAAGAGTGTTTGGTGGAATGGGGAAGGAGGGTGATGTGTCACGGAAAAAATAGGCCAATCGGCCGGCCAGTGATTCCGGTGGTGCTGATGGGTTCTGGTTTGCTTGAAGGTATGGAGGAGATGGTGGAGCTGTTAAGGATAGGGGTGAGGTGCACGGCGGAGACACCGCAGGCTCGGCCGACGATGAAGGAGGTTCTGGATATGCTGATCAAGGTGTATTACCCCAAAGTGGATTCAAGCTATGAAAATCTGAGTCATTAA 3297 0.4395 MSEHVTDFWGLLLICSLILFSVGKIVAGDSLDTDREVLLQLKLYLNNQTLVDQGRYTNWNTTSSNPCEWSGIWCSGGGEVTTTTRRVVGVDLSDNKITGEIFQNFSQLTHLTHLDLSRNTLSGKIPADLRRCQKLVYLNLSYNILPEELNLIGLTNLQTLDLSGNRLHGDLGLNFPAICDNLIRLNISGNNFTGRIDECFDQCSKLQYLDLSTNKLSGNIWMGIANLRMFSVSENFISGKIPPSAFPAQCNLQVLDISENMFTGNVPKEVANCKDLTILNLSSNKFNGSIPKEIGSISGIEALYLGNNSFSRDIPEELLNLTSLAFLDLTRNQFGGDIQEIFGKFKPVKYLLLHSNSYTGGLSSSGILRLPNVLRLDLSYNNFSGPLPTEISQMSSLKLLMLAYNRFNGIIPSEFGNLPHLQALDLSFNNLSGPIPPNLGNLTSLLWLMLANNSLTDEIPIELGNCSSLLWLNLANNKLSGKFPPELANIGRRAMVTFESNRQYDTVSAGSGECLAMKRWIPADYPPFSFVYDILTRNNCRRIWDRLLKGYGIFAVCSAGSFSTMSQISGYVQLSGNQLSGEIPPEIGTMQNLSLLHLGLNKFSGKLPVEVKNMPLVVLNITRNEFSGEIPSEIGTMKCLMNLDLSYNNFSGVFPSSLSSLTELSKFNISYNPLISGEIPSSGQLATFEKYSYLGDPLLDLPSFIDNSTDNHKNTTLRNRTIQKSTNLSVFMAFFAIILAFLVFGLLTVIICLLIKTPSEEPLLRDIKLDHESGTSSPWLSDTVKVIRLDRTAFTHTDILKATGNFSDHRIIGKGGFGTVYRGIFSDGREVAVKKLQREGLEGEKEFRAEMEVLSGHGLGWPHPNLVTLYGWCLDGSEKILVYEYISGGSLEDLVTDRLKFSWRRRLEVAIDVARALVYLHHECYPSIVHRDVKASNVLLDSKTGKAKVTDFGLARVVDVGDSHVSTMVAGTVGYVAPEYGHTWKATTKGDVYSYGVLAMELATGRRALDGGEECLVEWGRRVMCHGKNRPIGRPVIPVVLMGSGLLEGMEEMVELLRIGVRCTAETPQARPTMKEVLDMLIKVYYPKVDSSYENLSH 1098
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0641 1098 FunFam Putative LRR receptor-like serine/threonine-protein kinase 565 712 - -
Lele19g0641 1098 SUPERFAMILY Protein kinase-like (PK-like) 789 1082 IPR011009 -
Lele19g0641 1098 Gene3D Ribonuclease Inhibitor 342 614 IPR032675 -
Lele19g0641 1098 Pfam Leucine rich repeat N-terminal domain 32 75 IPR013210 -
Lele19g0641 1098 SUPERFAMILY RNI-like 85 291 - -
Lele19g0641 1098 Pfam Leucine rich repeat 90 143 IPR001611 GO:0005515
Lele19g0641 1098 Pfam Leucine rich repeat 392 431 IPR001611 GO:0005515
Lele19g0641 1098 Pfam Leucine rich repeat 155 216 IPR001611 GO:0005515
Lele19g0641 1098 Gene3D Ribonuclease Inhibitor 177 246 IPR032675 -
Lele19g0641 1098 FunFam Leucine-rich repeat receptor protein kinase MSP1 769 885 - -
Lele19g0641 1098 SMART serkin_6 806 1086 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele19g0641 1098 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 886 1089 - -
Lele19g0641 1098 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 243 338 - -
Lele19g0641 1098 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 346 1083 - -
Lele19g0641 1098 CDD STKc_IRAK 812 1083 - -
Lele19g0641 1098 Gene3D Ribonuclease Inhibitor 30 176 IPR032675 -
Lele19g0641 1098 Pfam Protein kinase domain 807 1078 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele19g0641 1098 SUPERFAMILY L domain-like 225 485 - -
Lele19g0641 1098 SMART LRR_typ_2 154 185 IPR003591 -
Lele19g0641 1098 SMART LRR_typ_2 418 441 IPR003591 -
Lele19g0641 1098 SMART LRR_typ_2 394 417 IPR003591 -
Lele19g0641 1098 SMART LRR_typ_2 442 466 IPR003591 -
Lele19g0641 1098 SMART LRR_typ_2 297 321 IPR003591 -
Lele19g0641 1098 SMART LRR_typ_2 108 132 IPR003591 -
Lele19g0641 1098 SMART LRR_typ_2 637 660 IPR003591 -
Lele19g0641 1098 ProSitePatterns Protein kinases ATP-binding region signature. 812 835 IPR017441 GO:0005524
Lele19g0641 1098 PRINTS Leucine-rich repeat signature 154 167 - -
Lele19g0641 1098 PRINTS Leucine-rich repeat signature 111 124 - -
Lele19g0641 1098 ProSiteProfiles Protein kinase domain profile. 806 1089 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele19g0641 1098 SUPERFAMILY L domain-like 572 680 - -
Lele19g0641 1098 Gene3D Ribonuclease Inhibitor 616 698 IPR032675 -
Lele19g0641 1098 ProSitePatterns Serine/Threonine protein kinases active-site signature. 928 940 IPR008271 GO:0004672|GO:0006468
Lele19g0641 1098 Gene3D Ribonuclease Inhibitor 247 341 IPR032675 -
Lele19g0641 1098 Gene3D Phosphorylase Kinase; domain 1 774 885 - -
Lele19g0641 1098 Gene3D Transferase(Phosphotransferase) domain 1 886 1090 - -
Lele19g0641 1098 FunFam Putative LRR receptor-like serine/threonine-protein kinase 345 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0641 Lele-ChrLele19 3683010 3686520 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0641 48 1084 Receptor kinase-like Gene Family AT4G39400 32.954 2.28e-150 478
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-2 Lele19g0641 Pkinase 8.9e-45 CL0016