Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0622 ATGGAAAACGTTGCGGCGGGACTCTGTAAGGAGGAAGAGAAAATGAATTTGCCTCCTGGATTTCGGTTTCATCCGACTGATGAAGAGCTTATAAGTCATTACCTGCACAAGAAGGTTACTGATTCAAGCTTCTCAGCCAGGGCAATTGGGGAGGTGGACTTGAACAGGTCTGAGCCTTGGGATTTGCCACGGAAAGCCAAAATGGGAGGAAAAGAGTGGTACTTCTTCTGCTTTAGAGACAGAAAATACCCAACTGGTTTGAGAACCAACAGGGCCACTGAAACAGGATACTGGAAAGCCACAGGGAAAGATAAAGATATTTACAGAGGAAAATCTCTGGTGGGAATGAAGAAAACTCTGGTTTTCTACAGAGGAAGAGCACCCAAAGGAGAGAAATCCAACTGGGTCATGCACGAATACAGATTAGAGGGCAAATTCTCTGTCCACAACCTCCCTAAAACCGCAAAGAATGAGTGGGTGATTTGCAGGGTTTTTCCAAAAGGTTCAAGTGGTAAGAAAACCCATATTTCTGGGATGATGAGGCTGGATTCTCTTGGAAATGAATTGGGTTCTTCTGGTTTACCTCCATTGACAGATTCGTCACCTTTCCCTGGCAACAAAGCCAAACCTGTCACAGAATCGGCTTACGTGCCCTGCTTCTCCAATCCAATCGATGTTCAGAGAACCAACAACCAAGGAGGGATCTTTGATTCCTACAACAACTTCCCTAATTATGGGGTTTCTCCGAATCCCTCAGACACCGTTCCCCGAATCCCACTTTCTGCTGGTTCGCTATATTCCACTCAACCACATCAAGCTCCTTCAAGTTTAGCTCTACCCAGTTCTATTTATGGCCTGCAAGACCAGACCCTGCTCAGAGCCTTGCTTGAAAACCAAGAATCAAGCAGGAACAATTTCAAGCCCGAGAGGGACATGATCAGTGTGTCGCAAGAAACAGGTCTTACTACAGACATGAACCCAGAAATCTCCTCGGTCGTGTCGAATCTTGATATGAGCCGAAGAACCTTTGACAATCAGCAGCAGCAGCAGCAACCAACTGCTTCATCTGCAGCAATGGACTATGAAGGTTTGTGGAACTACTCAGTTCAGATATAA 1116 0.4579 MENVAAGLCKEEEKMNLPPGFRFHPTDEELISHYLHKKVTDSSFSARAIGEVDLNRSEPWDLPRKAKMGGKEWYFFCFRDRKYPTGLRTNRATETGYWKATGKDKDIYRGKSLVGMKKTLVFYRGRAPKGEKSNWVMHEYRLEGKFSVHNLPKTAKNEWVICRVFPKGSSGKKTHISGMMRLDSLGNELGSSGLPPLTDSSPFPGNKAKPVTESAYVPCFSNPIDVQRTNNQGGIFDSYNNFPNYGVSPNPSDTVPRIPLSAGSLYSTQPHQAPSSLALPSSIYGLQDQTLLRALLENQESSRNNFKPERDMISVSQETGLTTDMNPEISSVVSNLDMSRRTFDNQQQQQQPTASSAAMDYEGLWNYSVQI 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0622 371 FunFam NAC domain-containing protein 100-like 26 171 - -
Lele19g0622 371 ProSiteProfiles NAC domain profile. 17 167 IPR003441 GO:0003677|GO:0006355
Lele19g0622 371 Gene3D NAC domain 26 171 IPR036093 GO:0003677|GO:0006355
Lele19g0622 371 Pfam No apical meristem (NAM) protein 18 142 IPR003441 GO:0003677|GO:0006355
Lele19g0622 371 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 16 308 - -
Lele19g0622 371 SUPERFAMILY NAC domain 14 167 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0622 Lele-ChrLele19 3599436 3600754 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0622 15 367 NAC Transcription Factor Family AT5G07680 57.183 6.06e-130 373
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele19g0622 NAM 5.3e-40 No_clan