Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele19g0598 | ATGGCCTCAAAAACCTCCACCTCTACCTCAGATCTGTTGTGCAGCGAGTTGAAGGAGGTCTCCGACGAGGTGTCTCGGCTTTCAGAAATGTGCAGCGTCACTGAGAGCTTTTCTACCACAACCGGCTTGGAGCCCTGCTCAACGGTTTTGGACTGTAGGCTTCATTGGGCTACACTTGAGCCCACATGCCATGAATCCAGTCAAACTCTCTCTGTTTCATGGAATGGTAGATTTGAGGTGAAGAGGTTCAGCATTTATCGGATCTTGTGGCTCTTAGCAAATTGCTACTTTGATTTGAGGACATGCTTTAATTTACTTCGTTTTTCGTCCTACCAGTCTATTGGAAGTCCTGAACTATGTTGTCCTGATCTCACTATGGGCAAGTCACCAGGAAAGTGGATCAAAACTGTACTGTTTGGAAGAAAACCGTCCAAATCAAATATTTCCAAAGGAAGAGAGAAACTTGTTAACCAGAAAGAAGCATCAGTTGCTTCCGAGGCATCAGAAACCGGTGTGGCTTTAGAACCACCCCCCTATACTGATGCCAGAAATGAGGAAGAGTTGGAATTGGAGAATAAAGAAGCAGAAAATCTTTCTCCCGTGAATCAGGAAACGGATTTGGTGCCACATGTTGATCAAGACGCACCACCTGATCCGGAGAAAATTAGGCAGGAGGAAGCTGCAACAAAGGCACAGGCTGCTTTTAGGGGTTATTTGGCTCGCAGGGCATTCAAGGCCTTAAAAGGCATAATAAGATTGCAAGCTCTTATTCGTGGGCACTTAGTTCGAAGACAAGCTGTTGCTACGTTATGTTCCATGTATGGGATAGTCAAATTTCAGGCTCTTGTTCGGGGAGGGAGTGTTAGACAGTCTCACGCTGGTTATGAAATCCGTGAGAAGTACAATATTTTGAAGCTTCAGGATGGAAAGCGTACCAATCCAGCTGATATAGCCACAAAATTTGTAAGGTTATCAACAAATACTTACAGCCGCAAGCTTATTGCATCATCTACCACGACAATGGCCTTGCGCCTGCAATATGTTCCTGGTGATCCGAATTCAGTGTTGAGTTGGTTGGAGCGCTGGTCTGCATCTCATTTTTGGGTACCGATTCCTCAACCCAAGAAAATTCCAGACCCTAGGTCTCGGAGAAAGCAAGCTGGAGAAGTTCAAATGAGCAAGTCAAGACGCACTAACCGGAAGCTTGCAACTGCAAATTCTGACTCAGTCTCAGTGCAAGCAAATCCTGAATTTGAGAAACCAAAAAGAAGCATGAGGAAAATTTCAAACCAAGCTGCAGATCCAGTGCAACAAAATCCACAAAGTGAGCTTGAAAAGATTAAGCGGAGCCTGAGAAAGGTCCATAACCCTGTTGTTGAGAATGCTGTTCCACCAGAAGTTGAATCTGAGACCCCAAAACAGCAATTGGAAAAGGCAAATGCTACCTCAGAACATATTGTTTTAGAGCAAGAGGCTGTTAGTTCTAATGAAATATCTAACATAGAACCAGCATTGGCTGAGCCTGTGCTCAATGTACCTGATGTGGAAATTACTCCTAGACCTTCGGTTAGCAAGGAGGTGTCTGAAATGTCAGGCGGCTATCAAGTGGAATTGGATCCAAAGCCCTCGGTAGAGAATACATGTAAAGATAAAAATGCTTCTGGTGATGAAGTTTTAAATGAGCCAAAAGGTCTACCAGAGAGTGGTTGTAAAGATGAAAATTCTCCCCTAGCAAATGGGGATCTGAATCATAAGGAAGATCCAACAGGCAATGAAAACCAGAGAGCCTCCAAGCGAGCCTCAGTTCCAGGGAAACAGGAACGTGCAGAGAATGGTATACAGAGTAGTCCAACATTACCAAGCTATATGGCAGCAACTGAATCAGCGAAGGCCAAGTTGAGGGCACAAGGGTCGCCAAGGCTTGGAGAAGATGGTGGCGAGAGAAACAACTCTGCACGGCGACATTCTTTGCCATCCTCAACTAACAGCAAAATTAGTTCGCATTCACCAAGGACACAGAGACCAGTTCAACCAGGCAGCAAAGGGGGACACAAAACTGTCTCATCTAGAGATGGAAATGGAAGAGTAATTCAAGCCGAGTGGCGGAGGTGA | 2112 | 0.4517 | MASKTSTSTSDLLCSELKEVSDEVSRLSEMCSVTESFSTTTGLEPCSTVLDCRLHWATLEPTCHESSQTLSVSWNGRFEVKRFSIYRILWLLANCYFDLRTCFNLLRFSSYQSIGSPELCCPDLTMGKSPGKWIKTVLFGRKPSKSNISKGREKLVNQKEASVASEASETGVALEPPPYTDARNEEELELENKEAENLSPVNQETDLVPHVDQDAPPDPEKIRQEEAATKAQAAFRGYLARRAFKALKGIIRLQALIRGHLVRRQAVATLCSMYGIVKFQALVRGGSVRQSHAGYEIREKYNILKLQDGKRTNPADIATKFVRLSTNTYSRKLIASSTTTMALRLQYVPGDPNSVLSWLERWSASHFWVPIPQPKKIPDPRSRRKQAGEVQMSKSRRTNRKLATANSDSVSVQANPEFEKPKRSMRKISNQAADPVQQNPQSELEKIKRSLRKVHNPVVENAVPPEVESETPKQQLEKANATSEHIVLEQEAVSSNEISNIEPALAEPVLNVPDVEITPRPSVSKEVSEMSGGYQVELDPKPSVENTCKDKNASGDEVLNEPKGLPESGCKDENSPLANGDLNHKEDPTGNENQRASKRASVPGKQERAENGIQSSPTLPSYMAATESAKAKLRAQGSPRLGEDGGERNNSARRHSLPSSTNSKISSHSPRTQRPVQPGSKGGHKTVSSRDGNGRVIQAEWRR | 703 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele19g0598 | 703 | MobiDBLite | consensus disorder prediction | 652 | 676 | - | - | |
| Lele19g0598 | 703 | MobiDBLite | consensus disorder prediction | 160 | 225 | - | - | |
| Lele19g0598 | 703 | MobiDBLite | consensus disorder prediction | 543 | 557 | - | - | |
| Lele19g0598 | 703 | MobiDBLite | consensus disorder prediction | 180 | 194 | - | - | |
| Lele19g0598 | 703 | ProSiteProfiles | IQ motif profile. | 248 | 275 | IPR000048 | GO:0005515 | |
| Lele19g0598 | 703 | MobiDBLite | consensus disorder prediction | 373 | 442 | - | - | |
| Lele19g0598 | 703 | MobiDBLite | consensus disorder prediction | 608 | 623 | - | - | |
| Lele19g0598 | 703 | Pfam | Protein of unknown function (DUF4005) | 606 | 682 | IPR025064 | - | |
| Lele19g0598 | 703 | MobiDBLite | consensus disorder prediction | 397 | 414 | - | - | |
| Lele19g0598 | 703 | MobiDBLite | consensus disorder prediction | 211 | 225 | - | - | |
| Lele19g0598 | 703 | PANTHER | IQ-DOMAIN 5-RELATED | 126 | 666 | - | - | |
| Lele19g0598 | 703 | Gene3D | - | 222 | 271 | - | - | |
| Lele19g0598 | 703 | ProSiteProfiles | IQ motif profile. | 224 | 252 | IPR000048 | GO:0005515 | |
| Lele19g0598 | 703 | MobiDBLite | consensus disorder prediction | 377 | 396 | - | - | |
| Lele19g0598 | 703 | MobiDBLite | consensus disorder prediction | 515 | 703 | - | - | |
| Lele19g0598 | 703 | SMART | iq_5 | 246 | 267 | IPR000048 | GO:0005515 | |
| Lele19g0598 | 703 | SMART | iq_5 | 223 | 245 | IPR000048 | GO:0005515 | |
| Lele19g0598 | 703 | Pfam | IQ calmodulin-binding motif | 226 | 245 | IPR000048 | GO:0005515 | |
| Lele19g0598 | 703 | Pfam | IQ calmodulin-binding motif | 248 | 265 | IPR000048 | GO:0005515 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele19g0598 | Lele-ChrLele19 | 3429270 | 3437092 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele19g0598 | 126 | 703 | IQD Protein Family | AT1G74690 | 43.092 | 2.26e-122 | 375 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lele17g0962 | 17 | 20574783 | 20579629 | Lele19g0598 | 19 | 3429270 | 3437092 | hybridization | |
| Lele18g0570 | 18 | 3362830 | 3368401 | Lele19g0598 | 19 | 3429270 | 3437092 | hybridization |