Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0575 ATGACCCTTAAAGGTTGCACAAAGCAGGCCTGCGCAGCTTGCAAATTTCAGAGAAGAAAGTGTACCCCAGAATGCGTTCTCGCTCCTTACTTCCCCGCCGACCAACCCAAGGCGTTTCAGAATGTCCACAAGCTGTTTGGAGTCAGCAACATCGAGAAGATCTTGAAGAACTTGGACCCTAGCCAGAAGAAAATAGCCATGGGCTCCATCATTTGCCAAGCTAATTACAGATATAAATACCCTGTTCATGGCTGTTGGGAGGAGATTTGCAGGCTTCGTTACCAAATATGGTACGTTGAAGAAGAGCTTCGTGCTGTTCATCTGCAACTAGAGATTTACAGACAACATTTTTTGCAGCAGCACCAAGGTTCTTCATCTTCGATGGTTGATGATGTCACTTCACAGTTAGAGTTAGGGATGACGACAGCTCGTAATAACTATGCAGTACCACTCTTCAACCATAGTCCTACATCATTAAACCCAGAGACATATAATTCAGAGGTTCCTTTGCCTGCAGTTTCCGACCAACATTCTTACTGCAACAGCAATAGTACTGTGGGTTATAACTCCATGGACGTGGACTCCAAGGATCATGTTGTTACACCAAATAGCTTGTGGGTCCATCAGCATCCCTGCCAAGACGATGATGGAGATTCCATTTCCATGGCCATGCATTCTCAGTTGCAGTTGGTTTCCTTGCAGCCACTGGAACAAAAAGTTGTCGGAAAATATTACGAAGAGATGATGAGTCCACTTTTTTGA 762 0.4475 MTLKGCTKQACAACKFQRRKCTPECVLAPYFPADQPKAFQNVHKLFGVSNIEKILKNLDPSQKKIAMGSIICQANYRYKYPVHGCWEEICRLRYQIWYVEEELRAVHLQLEIYRQHFLQQHQGSSSSMVDDVTSQLELGMTTARNNYAVPLFNHSPTSLNPETYNSEVPLPAVSDQHSYCNSNSTVGYNSMDVDSKDHVVTPNSLWVHQHPCQDDDGDSISMAMHSQLQLVSLQPLEQKVVGKYYEEMMSPLF 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0575 253 Pfam Lateral organ boundaries (LOB) domain 10 106 IPR004883 -
Lele19g0575 253 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
Lele19g0575 253 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 9 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0575 Lele-ChrLele19 3306964 3307725 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0575 1 210 AS2 family AT3G47870 42.489 7.01e-46 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele19g0575 LOB 2.6e-34 No_clan