Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele19g0574 | ATGGACCTTCTTGCGCCGGATAAGGATGAGAATCTTAAACATGACGCGTCGGATTTTGTCTCCCGAGTTCGACTCGTCCATGCTCCTATACTCTTATTTGTTTGCTTCCACGAGGCTCTGCGCGGAGAACTCAACGAGCTCCGGAGCTTGGCGGAAACGTCGTCGCTGGAGAATGCACCGCACAACCCCGAGCTTATTCTCAAACTTCAACGAAGATTCGAGTTTCTCAAACTAGTTCTCAAGTATCATTGCGTCGCGGAAGACGAGGTTATCTTCCCTGCATTGGATGTACATGTAAAAAATGTGGTATGTACTTATTCCCTTGAACATAATAGCACCGATGAAGCCTTCAACTCAATCTTTCACTATTTAGATGAGTTGATGGATCCAAATAAGAATATTTCCAAGCTGTTTGAAGAACTTATATGCTGCATTGGAATCTTGCAAGCCACCACATTCCAGCATATGCAGAAGGAAGAAGAGCAGGTTTTTCCTCTCTTAATGCAGAAAGTTTCTATCGAAGAACAGGCTTTGCTGGTCTGGCAATTCATATGCAGTATTCCTATAATGTTGCTTCAGGAAATTTTGCCATGGATGGTATCATTCCTTTCTGCAGACAAACAAGTAGAAGTTCGAAAGTTTTTAAACGAAATTACACCAATGGAGAAAGAACTGCAAGAGGTTTTGATTGCTTGGCTTGGTGGCAACACCCAAATCTTCACCGAGGACTGTTCTCTGAATGAAGTTGATCGATATGCTGACGGATTCCCACATATGAAAGGACCACGCGTGTTGAGTTATTGCAATAGGAATTTTAAAGCCCTTTCAAATCAGATGAAAGCAAATTGTTCAGATGTAGAAGATAGAGCCAATGAAGTTGATGTTCTTTATCTTTGGCATAATGCCATCAAGAAAGATATGAAAGAAATGTTAGAAGAACTTCATCAAATCAGAAAAAACACTTGTTTTCATAATTTGGATTCTTTACTTATCCAACTAAAATTCTTTGCTGAAGTTCTCGTCTTCTACAGCAATGCGCAGAAGAAATTCTTTTACCCAGTTTTGAGTGAACTTGCTTATGGCTTGTTGACCAAGTCTAGTGAACAATTTATTCGTGAAAGTCATATTGAAGATTTACAGCACTTGCTGTTGTATAATGCTGAAAGCGTTATGCCTTTGTCTGAATTTGTGGAGAAGCTTTGCAGAGACCTTGACCTATTTATGACACGAATCAACAAGCAATTTGATTTTCAAGAAACTGAGATATTTCCTGTCATTCGCTTGAATCGCAACAATGAAATGCTAGAGGAACTCATCAGCTTGTGCCTGCACATGATGCCACTTGGGTTGCTGAAATGCGTGATAACTTGGTTCTCAGGTCACTTATCTGAAAATGAATCTAGATCCATTCTCAGTGCCATGAAACAAGGAAATCCTTTTCTCCATGAACCTTTTGCATCACTAGTACATGAGTGGTTCCGTGTCGGTTATTCTGGTAAAATTTCTACCGAAAAATTCCGACAAAACTTGCGACATATTTTTAAAAGCAAAAACTCTTTGTTAACTGAGCAAGTCAAGGAAGCTCCCGGGTTTTCTTTCTTGAATTATGACAAGCCTCACAAAGGATCAGTTGGAAATAATGGTCTGTCTTCTTCATCATCTTCTGGATTCAACAATGTGACCAAGTATGAGACGCCATACTCTACGGGAATTAATATGCATATATTTTTTCCTGCCACAGCTATGAAGTTAAATCACCGTTCCATATTTCAGGCAGCTGATAGTTCTTGTGCTCCCTTTCTTGATGATTCAAAACCTATTGACCTTATATTTTTCTTTCACAAGGCTATCAAGAAAGATTTGGATTACCTTGTTCTTGGATCATCTCAGATAGAAAAAAATGTTGAGACGCTTGTGAATTTCAGCAAAAGATTTCATCTAATATGCTTTCTTCATCGAATCCATAGTGAGACAGAGGATGAGATAGCATTCCCAGCCTTAGAGGCAATGGGTAAAGTGAAAAATATTAGCCTCTCTTATACGATTGATCACAAATTTGAAGTTGAACACTTCAACAAAATATCCTGCATCCTTGATAAGATGTTCGATCTACATTTTTCAGTTTCCAGCTTTGAAACAAATACATGGGAGCAGAGAATGCTAATGCATCATCAGCTGTGCAGAAAGCTGCAGGAAATGTGCAAATCAATGCATAAACTACTTTCTGACCATATGAATCGTGAAGAAATTGAAATTTGGCATTTAATTAGAGAATTCTTCTCCAATAAGGAGCAAATAAAGATCGTAGGGTGCATGCTTGGAAGAATTAGAGCAGAAATATTGCAAGATATGATACCCTGGTTAATGACATCTTTAACCCCAGAGGAACAGCATGTTTTAATGTTCTTATGGTCCATGATTGCCAAAAATACAATGTTTGATGAATGGCTAGCTGAATGGTGGGATGGATACAGGATAAGAAAGGAGATAGAAAGATCAAATGATCCTCCTCTGCAGACTGTTGAGCCGTTGGAGATCATATCTAAATATTTATCTAAAGAAGTTCTCGATGAACTCCAAGAAGAATCCTCTTCCAACAAAAGCGAATCTTCTTCACAGAGGGATCATGTTGGTGATAATAATGAGCAGTCTCACAATTGCAATCGTCATGGCAAATCCCAGGTTCTTAAGGCAAAGAAGATTAGTAGTGAATGTTCAGAATGCAGAAACCAATTGAGTGATAATAACAAAACATGCACTAAAGTAACAGATATCACAAGTCCGATCAATGATAAAGGTCAGTCTCTTCAATTCGGTGAAAACTCTGGGCACTATGACCATCTTATGAAAATAAGTCCAGATGATCTGGAGATTGCCATAAGAAGGATATCTCGTGACTCTTCCTTAGATCTGCAGAAGAAGTCATACATAATCCAGAATCTGCTGATGAGCCGTTGGATTGTTAAACAGCATATCTCTTGTTCAGAAGGCACTGTCACAAACAATGGGCAGCAATTTCCTGGGCAGTATCCGTCTTACAGGGACCCTCTCAACGTAATCTATGGCTGCAAACACTACAAGAGAAGCTGTAAGCTTTTAGCTTCCTGTTGCAACCAACTTTATACATGCATTCATTGCCATAATGATGCATCAGATCATTTACTTGACAGGAAATCTATTACAAAGATGATGTGCATGAAATGCTTGAAGATTCAGCCAATCGGTGCCACATGTTCCACTGTATCTTGCGGTAACTTACCCATGGCAAAATACTACTGCAGGATCTGTAGGTTGTTCGATGATGAAAGGGAAATTTACCACTGTCCCTATTGTAACCTGTGCCGAGTTGGAAAGGGCTTGGGCTTAGACTACTTTCATTGTATGAATTGCAATGCTTGTATGTCTCGTTCCCTTACAGTACATATATGCAGAGAGAAATCTTTAGAGGACAACTGCCCAATTTGTCATGAATACATCTTTACGTCCTGCTCTCCAGTAAAGGCCCTTCAATGCGGTCATGTCATGCACTCAACATGTTTTCAGGAGTATACCTACTTCAATTATACATGTCCAATATGTTACAAGTCACTTGGAGACATGCAGGTGTATTTTAGGATGTTAGATGCGTTATTGGCTGAAGAGAAAATGCCAGACGAGCATTTGGGTCAAACTCAGATGATACTATGCCATGACTGTGAAAAGAAAGGAACAGCTCCATTCCACTGGCTTTACCACAAATGCTCTTCTTGCGGGTCCTACAACACCAGAGTTATATGA | 3777 | 0.3942 | MDLLAPDKDENLKHDASDFVSRVRLVHAPILLFVCFHEALRGELNELRSLAETSSLENAPHNPELILKLQRRFEFLKLVLKYHCVAEDEVIFPALDVHVKNVVCTYSLEHNSTDEAFNSIFHYLDELMDPNKNISKLFEELICCIGILQATTFQHMQKEEEQVFPLLMQKVSIEEQALLVWQFICSIPIMLLQEILPWMVSFLSADKQVEVRKFLNEITPMEKELQEVLIAWLGGNTQIFTEDCSLNEVDRYADGFPHMKGPRVLSYCNRNFKALSNQMKANCSDVEDRANEVDVLYLWHNAIKKDMKEMLEELHQIRKNTCFHNLDSLLIQLKFFAEVLVFYSNAQKKFFYPVLSELAYGLLTKSSEQFIRESHIEDLQHLLLYNAESVMPLSEFVEKLCRDLDLFMTRINKQFDFQETEIFPVIRLNRNNEMLEELISLCLHMMPLGLLKCVITWFSGHLSENESRSILSAMKQGNPFLHEPFASLVHEWFRVGYSGKISTEKFRQNLRHIFKSKNSLLTEQVKEAPGFSFLNYDKPHKGSVGNNGLSSSSSSGFNNVTKYETPYSTGINMHIFFPATAMKLNHRSIFQAADSSCAPFLDDSKPIDLIFFFHKAIKKDLDYLVLGSSQIEKNVETLVNFSKRFHLICFLHRIHSETEDEIAFPALEAMGKVKNISLSYTIDHKFEVEHFNKISCILDKMFDLHFSVSSFETNTWEQRMLMHHQLCRKLQEMCKSMHKLLSDHMNREEIEIWHLIREFFSNKEQIKIVGCMLGRIRAEILQDMIPWLMTSLTPEEQHVLMFLWSMIAKNTMFDEWLAEWWDGYRIRKEIERSNDPPLQTVEPLEIISKYLSKEVLDELQEESSSNKSESSSQRDHVGDNNEQSHNCNRHGKSQVLKAKKISSECSECRNQLSDNNKTCTKVTDITSPINDKGQSLQFGENSGHYDHLMKISPDDLEIAIRRISRDSSLDLQKKSYIIQNLLMSRWIVKQHISCSEGTVTNNGQQFPGQYPSYRDPLNVIYGCKHYKRSCKLLASCCNQLYTCIHCHNDASDHLLDRKSITKMMCMKCLKIQPIGATCSTVSCGNLPMAKYYCRICRLFDDEREIYHCPYCNLCRVGKGLGLDYFHCMNCNACMSRSLTVHICREKSLEDNCPICHEYIFTSCSPVKALQCGHVMHSTCFQEYTYFNYTCPICYKSLGDMQVYFRMLDALLAEEKMPDEHLGQTQMILCHDCEKKGTAPFHWLYHKCSSCGSYNTRVI | 1258 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele19g0574 | 1258 | CDD | Hr-like | 608 | 753 | - | - | |
Lele19g0574 | 1258 | Coils | Coil | 300 | 320 | - | - | |
Lele19g0574 | 1258 | Pfam | CHY zinc finger | 1023 | 1098 | IPR008913 | GO:0008270 | |
Lele19g0574 | 1258 | MobiDBLite | consensus disorder prediction | 858 | 893 | - | - | |
Lele19g0574 | 1258 | CDD | RING-H2_Pirh2 | 1151 | 1194 | - | - | |
Lele19g0574 | 1258 | Pfam | Hemerythrin HHE cation binding domain | 37 | 167 | IPR012312 | - | |
Lele19g0574 | 1258 | SUPERFAMILY | CHY zinc finger-like | 1014 | 1079 | IPR037274 | GO:0008270 | |
Lele19g0574 | 1258 | Gene3D | - | 1223 | 1258 | - | - | |
Lele19g0574 | 1258 | FunFam | Zinc finger protein-related isoform 1 | 1147 | 1196 | - | - | |
Lele19g0574 | 1258 | PANTHER | RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 | 651 | 1258 | - | - | |
Lele19g0574 | 1258 | ProSiteProfiles | Zinc finger CTCHY-type profile. | 1088 | 1151 | IPR017921 | - | |
Lele19g0574 | 1258 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 1145 | 1195 | IPR013083 | - | |
Lele19g0574 | 1258 | ProSiteProfiles | Zinc finger CHY-type profile. | 1016 | 1085 | IPR008913 | GO:0008270 | |
Lele19g0574 | 1258 | Gene3D | nmb1532 protein domain like | 604 | 774 | - | - | |
Lele19g0574 | 1258 | Gene3D | nmb1532 protein domain like | 288 | 442 | - | - | |
Lele19g0574 | 1258 | Gene3D | nmb1532 protein domain like | 28 | 185 | - | - | |
Lele19g0574 | 1258 | MobiDBLite | consensus disorder prediction | 858 | 886 | - | - | |
Lele19g0574 | 1258 | CDD | Hr-like | 36 | 165 | - | - | |
Lele19g0574 | 1258 | ProSiteProfiles | Zinc finger RING-type profile. | 1152 | 1193 | IPR001841 | - | |
Lele19g0574 | 1258 | SMART | ring_2 | 1152 | 1193 | IPR001841 | - | |
Lele19g0574 | 1258 | Pfam | Ring finger domain | 1150 | 1193 | IPR001841 | - | |
Lele19g0574 | 1258 | Pfam | Zinc-ribbon | 1199 | 1256 | IPR039512 | - | |
Lele19g0574 | 1258 | SUPERFAMILY | RING/U-box | 1139 | 1198 | - | - | |
Lele19g0574 | 1258 | SUPERFAMILY | Zinc hairpin stack | 1089 | 1143 | IPR037275 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele19g0574 | Lele-ChrLele19 | 3297018 | 3305991 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele19g0574 | 28 | 849 | C2H2 Transcription Factor Family | AT3G18290 | 32.251 | 4.32e-120 | 401 |