Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0573 ATGCACGGTGTTGGTCTTATGGGCTCAATACGTGCCTGCATGACATTTGTCTTCGGTTCAGTGCGCTTTATTGGATCTTATATATTCTCTGTTAGAGTAGGTGGGTATATAGATGACAAAGAAGCTTCAGAAGGGTATACATGCAATGGAACTCATTGTTTTATGTTATCTTTCCTTATAATGGCTTCTGCTGCTATTTTGGGTTCTCTGGTGGCTGCTTTAGGCTTTGGCAGAGTATGGCTAGCTTCAATTCCTAATGAAGGGTCTAATGGGATTTTGGAACTTGATGAATCCAAACCCTTCCTTGATATCTGTGATCACATTCTGTTTGATTCTGGGCACGGTTTGATGGGAAGTGCATTTCATCCAAACTTCACACAAAATGGCTGCTTCTTTCTTTCATATTCTTGTGATCAGACCACAAATCCTAGCTGTTCAGGGAGATGTGCTTGTAACTCAGATGTGAATTGTGACCCTTCGAAACTCGGTTTCGATGACGGTATCCTGCCATGTCAGTATCATGTTGTAGTTGCAGAGTTTACAGTCAAGGGATCAGCATCAGAGCCTTCCCTGGCTGAAAGTGCCGATCCATTGGAAGTGAGAAGGATATTCACAATGGGTGTTCCGTACAGAGGAGACCATGCTGGTCAGATTCTCTTTGGACCCTTAGATGGATACTTGCACCTCCTGATGGCAGATGGTTCTGATCATGATGATCCTTACAAATTTTCCCAGAACAAGAGGTCGTTTCTGGTGAAGTGTTTGAGGATTGAAGCAGACAATTTACCATCAGAGATTGATAATAACATAGCTGGTTCTGCATCCATTGTAGATGGCTATTTCTATCGCTCCATAACTGATCCTTGCATGTGTGGAAGTGCCAAAATTCCTTGTACACGTGCTTCTGATTCTACAACGCAATGCTCTTTTGTGAAGGGAACAGGAAGGACAGTTACTGTCTCACAAGCACTGGGGTTTATAGAGCGACACGACCAAGACGTTGTAGATATATGTGTACCAAGGAAAAGGCTTTTGCTTCAGAACATAAGAAACCTCACTCTTCTTCTTCCTCATTTACTGAAGATGTTGCTTTCCTTATGTTGTTAG 1107 0.4255 MHGVGLMGSIRACMTFVFGSVRFIGSYIFSVRVGGYIDDKEASEGYTCNGTHCFMLSFLIMASAAILGSLVAALGFGRVWLASIPNEGSNGILELDESKPFLDICDHILFDSGHGLMGSAFHPNFTQNGCFFLSYSCDQTTNPSCSGRCACNSDVNCDPSKLGFDDGILPCQYHVVVAEFTVKGSASEPSLAESADPLEVRRIFTMGVPYRGDHAGQILFGPLDGYLHLLMADGSDHDDPYKFSQNKRSFLVKCLRIEADNLPSEIDNNIAGSASIVDGYFYRSITDPCMCGSAKIPCTRASDSTTQCSFVKGTGRTVTVSQALGFIERHDQDVVDICVPRKRLLLQNIRNLTLLLPHLLKMLLSLCC 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0573 368 PANTHER HEDGEHOG-INTERACTING PROTEIN 75 261 - -
Lele19g0573 368 Gene3D - 68 286 IPR011042 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0573 Lele-ChrLele19 3289918 3294619 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0573 24 78 Nodulin-like Gene Family AT1G74780 67.857 1.69e-13 69.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele18g0547 18 3225656 3227626 Lele19g0573 19 3289918 3294619 hybridization