Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0572 ATGTCTGAAGGATCTCCCTCTCCTCCTCCGATTTCCGGCGAACCCGGTAACGGATCCTCGCCGGAACCAAATTCCGAAAACCATGTCCCTGATTCCCAAAACGGGGTTGCCACTTCTAAGGAAGAAACGACAACCGCTCCTACCACTACGAGGAGCAACCGGCCGTCGCGCGCGTGCACCATTCGCGCTGCGTCTCGTCTCTATTCATCGGTGCAGCCGGCGATCCGACGGAAGTCCAAAGAGGCAAAGAAGGAGGAGAAGCAGGAGAACTTGCCGCTGCAGCAATGCAGCAAGATCGTGACGCCGTTAGTAGAACCGCCCCCACCTTCGCAGTTGCCTCGGTGGAACCTGCGGTCCATGTGGGAATTAGCTTCTGTACTCAATTTCTTGCATGTATTTGGGCCTCTCTTAAACATCTCAGTAGAATTCTCGGCTGAAGAATTTGAGACAGCTCTCCTTATGCCCAACGACACATTGAGTGATATACATATGCCGTTGTTAAAGGCAATCCCTCCCATTACAAGAATGGCTCTCACACGTGATACTTGGATAACTGTGTTATGCAGAAAATTGAGAGATTGGTGGTTTTGGGTTGCTGATGGGGATGTTCCAATTGTTGCTTCACATGGGGCGGAGGTTGAAGCTTATAAGTCACTTGATCCCGGGGTCCGTGTTGTCATCTTAAAAGCTTTATGTGACATTCGTGTGGAGCAAGAAGATATCCGAAGTTACATTGACAACTCACTCAGACATGGCGTTCAACTATCAACATTTCGTAAAGAGCGTATTGGGGGTGATTCTCATGGAATTTCTTATTGGTATGAAGATGACCCAATTATGGGTCATAGGTTATACCGTGAAACAAGGAAAACTGAAGTAGTTCAGGTGAAGAAGGGGAAGGCAAAAGGTTCAAAGGTTGTTTCTAATACGTCATATCAGTGGGAAGCTGTTGCTACCAATTTTGATGAATTTCAAGATGTTTCTGAGAAGCTTTGCTCAAGTAGAAATAGAACAGAGGCTTCTCTAGGGAAAAAGCTAAAGATAGACATGCTTCCTGAGATTGAGAAAGTTCACAAGAGGAAGGAGAGGTTGCTGAAAAAGCAACACAGACAGGCTCTTCTTCTTGATAATTTCTTAGGGGTTGATGGCCTTGCTACTGGGCGCTCCCTTCGTGATAGGAAACCTGTTACTTACACATTTGATGATTATGATCGGTCCATCAATGAGGCGATTAAAGTAACCAAGTATGAAATTCATCTTAACCTTCTCTCTGCCTGTTCTTGA 1284 0.4618 MSEGSPSPPPISGEPGNGSSPEPNSENHVPDSQNGVATSKEETTTAPTTTRSNRPSRACTIRAASRLYSSVQPAIRRKSKEAKKEEKQENLPLQQCSKIVTPLVEPPPPSQLPRWNLRSMWELASVLNFLHVFGPLLNISVEFSAEEFETALLMPNDTLSDIHMPLLKAIPPITRMALTRDTWITVLCRKLRDWWFWVADGDVPIVASHGAEVEAYKSLDPGVRVVILKALCDIRVEQEDIRSYIDNSLRHGVQLSTFRKERIGGDSHGISYWYEDDPIMGHRLYRETRKTEVVQVKKGKAKGSKVVSNTSYQWEAVATNFDEFQDVSEKLCSSRNRTEASLGKKLKIDMLPEIEKVHKRKERLLKKQHRQALLLDNFLGVDGLATGRSLRDRKPVTYTFDDYDRSINEAIKVTKYEIHLNLLSACS 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0572 427 MobiDBLite consensus disorder prediction 1 93 - -
Lele19g0572 427 MobiDBLite consensus disorder prediction 76 91 - -
Lele19g0572 427 MobiDBLite consensus disorder prediction 17 67 - -
Lele19g0572 427 PANTHER REMODELING AND SPACING FACTOR 1 50 408 IPR028938 GO:0006355|GO:0031213
Lele19g0572 427 Pfam DDT domain 125 170 IPR018501 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0572 Lele-ChrLele19 3281942 3287618 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Lele19g0572 DDT 2.1e-07 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g0987 17 20720096 20727028 Lele19g0572 19 3281942 3287618 hybridization
Lele18g0546 18 3215243 3220907 Lele19g0572 19 3281942 3287618 hybridization